RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 AGRPO00253 132 aa17.41■□□□□ 0.38
CRTC3-208ENST00000560098 HTRA2O43464 458 aaPredicted RBP17.41■□□□□ 0.38
CRTC3-208ENST00000560098 CNGA3Q16281 694 aa17.41■□□□□ 0.38
CRTC3-208ENST00000560098 ZNF571Q7Z3V5 609 aaPredicted RBP17.41■□□□□ 0.38
CRTC3-208ENST00000560098 TMPRSS9Q7Z410 1059 aa17.41■□□□□ 0.38
CRTC3-208ENST00000560098 HEATR4Q86WZ0 1026 aa17.41■□□□□ 0.38
CRTC3-208ENST00000560098 SLITRK4Q8IW52 837 aa17.41■□□□□ 0.38
CRTC3-208ENST00000560098 GPBAR1Q8TDU6 330 aa17.41■□□□□ 0.38
CRTC3-208ENST00000560098 CARS2Q9HA77 564 aaKnown RBP17.41■□□□□ 0.38
CRTC3-208ENST00000560098 RTN4Q9NQC3 1192 aaKnown RBP17.41■□□□□ 0.38
CRTC3-208ENST00000560098 PHPT1Q9NRX4 125 aaPredicted RBP17.41■□□□□ 0.38
CRTC3-208ENST00000560098 SPATS2LQ9NUQ6 558 aaKnown RBP17.41■□□□□ 0.38
CRTC3-208ENST00000560098 SCINQ9Y6U3 715 aa17.41■□□□□ 0.38
CRTC3-208ENST00000560098 COL6A6A6NMZ7 2263 aa17.41■□□□□ 0.38
CRTC3-208ENST00000560098 HEXIM1O94992 359 aaKnown RBP17.4■□□□□ 0.38
CRTC3-208ENST00000560098 PEX11BO96011 259 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 CPP00450 1065 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 CCNB1P14635 433 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 CR2P20023 1033 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 NFKBIAP25963 317 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 VIPR1P32241 457 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 PCK1P35558 622 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 B4GALNT1Q00973 533 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 DPYSL2Q16555 572 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 MAP9Q49MG5 647 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 PHF19Q5T6S3 580 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 USP53Q70EK8 1073 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 NRROSQ86YC3 692 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 ZNF653Q96CK0 615 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 NUDCD1Q96RS6 583 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 TEX101Q9BY14 249 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 GSDMCQ9BYG8 508 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 SEMA6CQ9H3T2 930 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 SUDS3Q9H7L9 328 aaPredicted RBP17.4■□□□□ 0.38
CRTC3-208ENST00000560098 MRPL47Q9HD33 250 aaKnown RBP17.4■□□□□ 0.38
CRTC3-208ENST00000560098 AIPL1Q9NZN9 384 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 SEPT10Q9P0V9 454 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 PIEZO2Q9H5I5 2752 aa17.4■□□□□ 0.38
CRTC3-208ENST00000560098 PRAMEF33A0A0G2JMD5 474 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 DDX3XO00571 662 aaKnown RBP eCLIP17.39■□□□□ 0.382e-15■■■■□ 20.5
CRTC3-208ENST00000560098 B4GAT1O43505 415 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 PRAMEF10O60809 474 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 FUCA1P04066 466 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 FGF1P05230 155 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 CEACAM5P06731 702 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 IL1R2P27930 398 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 ARL4AP40617 200 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 ETV5P41161 510 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 PRKCIP41743 596 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 MAZP56270 477 aaKnown RBP17.39■□□□□ 0.38
CRTC3-208ENST00000560098 TYRO3Q06418 890 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 ILF3Q12906 894 aaKnown RBP eCLIP17.39■□□□□ 0.38
CRTC3-208ENST00000560098 SRSF6Q13247 344 aaKnown RBP17.39■□□□□ 0.38
CRTC3-208ENST00000560098 SMTNL2Q2TAL5 461 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 E4F1Q66K89 784 aaPredicted RBP17.39■□□□□ 0.38
CRTC3-208ENST00000560098 DENND2CQ68D51 928 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 TMCO3Q6UWJ1 677 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 PIM3Q86V86 326 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 C17orf82Q86X59 251 aaPredicted RBP17.39■□□□□ 0.38
CRTC3-208ENST00000560098 CBARPQ8N350 705 aaPredicted RBP17.39■□□□□ 0.38
CRTC3-208ENST00000560098 BBS5Q8N3I7 341 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 PGBD5Q8N414 524 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 USP7Q93009 1102 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 SGF29Q96ES7 293 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 TRIM11Q96F44 468 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 DTD2Q96FN9 168 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 MGME1Q9BQP7 344 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 NAT10Q9H0A0 1025 aaKnown RBP17.39■□□□□ 0.38
CRTC3-208ENST00000560098 NOD2Q9HC29 1040 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 ETNK2Q9NVF9 386 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 TRNAU1APQ9NX07 287 aaKnown RBP17.39■□□□□ 0.38
CRTC3-208ENST00000560098 MYO1AQ9UBC5 1043 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 PHTF1Q9UMS5 762 aa17.39■□□□□ 0.38
CRTC3-208ENST00000560098 PSMD11O00231 422 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 MAFKO60675 156 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 CPNE6O95741 557 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 MYBL1P10243 752 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 CYP2A6P11509 494 aaPredicted RBP17.38■□□□□ 0.37
CRTC3-208ENST00000560098 LHCGRP22888 699 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 AMPD1P23109 780 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 ETV3P41162 512 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 MAPK10P53779 464 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 OR1D5P58170 312 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 CDK3Q00526 305 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 KLHL30Q0D2K2 578 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 TRAF2Q12933 501 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 BOLA3Q53S33 107 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 CCDC183Q5T5S1 534 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 ZNF438Q7Z4V0 828 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 HSD11B1LQ7Z5J1 315 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 POLNQ7Z5Q5 900 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 ZDHHC1Q8WTX9 485 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 HSPH1Q92598 858 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 CSPG4P5Q96PW8 444 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 FRMD8Q9BZ67 464 aaPredicted RBP17.38■□□□□ 0.37
CRTC3-208ENST00000560098 RDH14Q9HBH5 336 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.38■□□□□ 0.37
CRTC3-208ENST00000560098 FOXJ2Q9P0K8 574 aa17.38■□□□□ 0.37
CRTC3-208ENST00000560098 AKAP7Q9P0M2 348 aaPredicted RBP17.38■□□□□ 0.37
CRTC3-208ENST00000560098 TAAR2Q9P1P5 351 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms