RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 AARSD1Q9BTE6 412 aaKnown RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 TFB2MQ9H5Q4 396 aaKnown RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 GTSE1Q9NYZ3 720 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 PRPF19Q9UMS4 504 aaKnown RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 MIA3Q5JRA6 1907 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 OR51F1A6NGY5 319 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 MEI4A8MW99 385 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 GJB3O75712 270 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 KRT36O76013 467 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 IRF1P10914 325 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 PIK3R1P27986 724 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 BTKQ06187 659 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 CYLC2Q14093 348 aaPredicted RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 NXNQ6DKJ4 435 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 CXorf57Q6NSI4 855 aaKnown RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 PGM2L1Q6PCE3 622 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 FRMD7Q6ZUT3 714 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 LDB1Q86U70 411 aaPredicted RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 ANKRD49Q8WVL7 239 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 LENG8Q96PV6 779 aaPredicted RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 PANX3Q96QZ0 392 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 SUDS3Q9H7L9 328 aaPredicted RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 MRPL17Q9NRX2 175 aaKnown RBP11.29□□□□□ -0.6
CLPX-204ENST00000559152 TMEM39AQ9NV64 488 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 TAS2R13Q9NYV9 303 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 TBX21Q9UL17 535 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 ASB3Q9Y575 518 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 RAI2Q9Y5P3 530 aa11.29□□□□□ -0.6
CLPX-204ENST00000559152 C2orf78A6NCI8 922 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 ANKRD66B4E2M5 251 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 CCL22O00626 93 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 TSPAN3O60637 253 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 NDUFS3O75489 264 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 PYGLP06737 847 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 RPSAP08865 295 aaKnown RBP11.28□□□□□ -0.6
CLPX-204ENST00000559152 CD1DP15813 335 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 PPM1AP35813 382 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 TTPAP49638 278 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 ATP6V0D1P61421 351 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 SMAD3P84022 425 aaKnown RBP11.28□□□□□ -0.6
CLPX-204ENST00000559152 PDCD2Q16342 344 aaPredicted RBP11.28□□□□□ -0.6
CLPX-204ENST00000559152 MUM1Q2TAK8 710 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 AARS2Q5JTZ9 985 aaKnown RBP11.28□□□□□ -0.6
CLPX-204ENST00000559152 CUZD1Q86UP6 607 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 MYLK4Q86YV6 388 aaPredicted RBP11.28□□□□□ -0.6
CLPX-204ENST00000559152 KYQ8NBH2 561 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 KCNV2Q8TDN2 545 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 UNKQ9C0B0 810 aaKnown RBP11.28□□□□□ -0.6
CLPX-204ENST00000559152 ALG9Q9H6U8 611 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 BATF3Q9NR55 127 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 BCAP29Q9UHQ4 241 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 CDH22Q9UJ99 828 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 ZNF510Q9Y2H8 683 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 INSL5Q9Y5Q6 135 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 COMMD10Q9Y6G5 202 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 MYLKQ15746 1914 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 TBL1XO60907 577 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 SLC4A1P02730 911 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 F11P03951 625 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 ZNF37AP17032 561 aaPredicted RBP11.28□□□□□ -0.6
CLPX-204ENST00000559152 ITGAXP20702 1163 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 CD9P21926 228 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 SP100P23497 879 aaPredicted RBP11.28□□□□□ -0.6
CLPX-204ENST00000559152 CCR10P46092 362 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 RGRP47804 291 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 SGSHP51688 502 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 HERVK_113P63132 956 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 ARF5P84085 180 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 MAPRE2Q15555 327 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 ZNF549Q6P9A3 640 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 TMEM207Q6UWW9 146 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 LRRC74BQ6ZQY2 392 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 C16orf59Q7L2K0 433 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 METTL3Q86U44 580 aaKnown RBP11.28□□□□□ -0.6
CLPX-204ENST00000559152 DEFB107AQ8IZN7 70 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 FBXW8Q8N3Y1 598 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 CARNMT1Q8N4J0 409 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 LPCAT1Q8NF37 534 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 OR4K2Q8NGD2 314 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 DNAJC9Q8WXX5 260 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 TMA16Q96EY4 203 aaKnown RBP11.28□□□□□ -0.6
CLPX-204ENST00000559152 NAF1Q96HR8 494 aaKnown RBP11.28□□□□□ -0.6
CLPX-204ENST00000559152 CLPTM1LQ96KA5 538 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 ERVK-6Q9BXR3 956 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 ZNF385DQ9H6B1 395 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 EFCAB1Q9HAE3 211 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 MEAF6Q9HAF1 191 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 ZBTB26Q9HCK0 441 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 CYP4F12Q9HCS2 524 aa11.28□□□□□ -0.6
CLPX-204ENST00000559152 LSM7Q9UK45 103 aaKnown RBP11.28□□□□□ -0.6
CLPX-204ENST00000559152 NEMP2A6NFY4 417 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 NVLO15381 856 aaKnown RBP11.27□□□□□ -0.61
CLPX-204ENST00000559152 BUD23O43709 281 aaKnown RBP11.27□□□□□ -0.61
CLPX-204ENST00000559152 TBX10O75333 385 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 RHOBTB1O94844 696 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 TMCC1O94876 653 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 OLFM2O95897 454 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 PRLP01236 227 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 PIRTP0C851 137 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 HNRNPLP14866 589 aaKnown RBP eCLIP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms