RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 RHOAP61586 193 aa12.98□□□□□ -0.33
SMAD3-207ENST00000558763 TMPRSS15P98073 1019 aa12.98□□□□□ -0.33
SMAD3-207ENST00000558763 GRM2Q14416 872 aa12.98□□□□□ -0.33
SMAD3-207ENST00000558763 CCDC153Q494R4 210 aa12.98□□□□□ -0.33
SMAD3-207ENST00000558763 RNF187Q5TA31 235 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-207ENST00000558763 TMEM25Q86YD3 366 aa12.98□□□□□ -0.33
SMAD3-207ENST00000558763 C10orf107Q8IVU9 208 aa12.98□□□□□ -0.33
SMAD3-207ENST00000558763 TRIM42Q8IWZ5 723 aa12.98□□□□□ -0.33
SMAD3-207ENST00000558763 OTUD6BQ8N6M0 293 aa12.98□□□□□ -0.33
SMAD3-207ENST00000558763 LPCAT1Q8NF37 534 aa12.98□□□□□ -0.33
SMAD3-207ENST00000558763 ZNF398Q8TD17 642 aa12.98□□□□□ -0.33
SMAD3-207ENST00000558763 STYXQ8WUJ0 223 aa12.98□□□□□ -0.33
SMAD3-207ENST00000558763 ACDQ96AP0 544 aa12.98□□□□□ -0.33
SMAD3-207ENST00000558763 ASIC4Q96FT7 647 aa12.98□□□□□ -0.33
SMAD3-207ENST00000558763 PLA2G2FQ9BZM2 168 aa12.98□□□□□ -0.33
SMAD3-207ENST00000558763 NLE1Q9NVX2 485 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-207ENST00000558763 MTF2Q9Y483 593 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-207ENST00000558763 ANKRD66B4E2M5 251 aa12.97□□□□□ -0.33
SMAD3-207ENST00000558763 UBOX5O94941 541 aa12.97□□□□□ -0.33
SMAD3-207ENST00000558763 PRSS56P0CW18 603 aa12.97□□□□□ -0.33
SMAD3-207ENST00000558763 SLC8A1P32418 973 aa12.97□□□□□ -0.33
SMAD3-207ENST00000558763 CTSOP43234 321 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-207ENST00000558763 TIAL1Q01085 375 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMAD3-207ENST00000558763 RALGPS1Q5JS13 557 aa12.97□□□□□ -0.33
SMAD3-207ENST00000558763 PTCRAQ6ISU1 281 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-207ENST00000558763 TTC30BQ8N4P2 665 aa12.97□□□□□ -0.33
SMAD3-207ENST00000558763 OR6P1Q8NGX9 317 aa12.97□□□□□ -0.33
SMAD3-207ENST00000558763 KCTD4Q8WVF5 259 aa12.97□□□□□ -0.33
SMAD3-207ENST00000558763 CDKN2AIPNLQ96HQ2 116 aa12.97□□□□□ -0.33
SMAD3-207ENST00000558763 NDNQ99608 321 aa12.97□□□□□ -0.33
SMAD3-207ENST00000558763 PLCD4Q9BRC7 762 aa12.97□□□□□ -0.33
SMAD3-207ENST00000558763 RPP25Q9BUL9 199 aaKnown RBP12.97□□□□□ -0.33
SMAD3-207ENST00000558763 DUS2Q9NX74 493 aaKnown RBP12.97□□□□□ -0.33
SMAD3-207ENST00000558763 KIAA1522Q9P206 1035 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-207ENST00000558763 ANKRD6Q9Y2G4 727 aa12.97□□□□□ -0.33
SMAD3-207ENST00000558763 USH1CQ9Y6N9 552 aa12.97□□□□□ -0.33
SMAD3-207ENST00000558763 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-207ENST00000558763 TK2O00142 265 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 TRAFD1O14545 582 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-207ENST00000558763 ITM2AO43736 263 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 CLCN5P51795 746 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 PRAMEP78395 509 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 POU4F1Q01851 419 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 CCDC15Q0P6D6 951 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 LAMB3Q13751 1172 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 TAF1AQ15573 450 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-207ENST00000558763 TYSND1Q2T9J0 566 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 LEXMQ3ZCV2 418 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 FUT11Q495W5 492 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 PITRM1Q5JRX3 1037 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 ATG16L1Q676U5 607 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 ZNF549Q6P9A3 640 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 LCA5Q86VQ0 697 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 LMNTD2Q8IXW0 634 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 OSCP1Q8WVF1 389 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 EID2BQ96D98 161 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 RMDN1Q96DB5 314 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 SORT1Q99523 831 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 TM6SF2Q9BZW4 377 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 NMRAL1Q9HBL8 299 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 ABCB8Q9NUT2 735 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 TBC1D14Q9P2M4 693 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 EPS15L1Q9UBC2 864 aa12.96□□□□□ -0.33
SMAD3-207ENST00000558763 KIF26AQ9ULI4 1882 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-207ENST00000558763 A0A0U1RQS6 177 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 CXorf51AA0A1B0GTR3 108 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 DNAJC6O75061 913 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 LYPLA1O75608 230 aaPredicted RBP12.96□□□□□ -0.34
SMAD3-207ENST00000558763 FSBPO95073 299 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 COL6A2P12110 1019 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 IL9P15248 144 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 STMN1P16949 149 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 SAT1P21673 171 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 SCTRP47872 440 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 STK19P49842 368 aaPredicted RBP12.96□□□□□ -0.34
SMAD3-207ENST00000558763 AP1S1P61966 158 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 SLC12A1Q13621 1099 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 SMAD2Q15796 467 aaKnown RBP12.96□□□□□ -0.34
SMAD3-207ENST00000558763 DGKKQ5KSL6 1271 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 LY6G5CQ5SRR4 150 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 RETSATQ6NUM9 610 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 NAPRTQ6XQN6 538 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 GLT6D1Q7Z4J2 308 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 YAF2Q8IY57 180 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 GPATCH11Q8N954 259 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 OR4K2Q8NGD2 314 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 OR6K2Q8NGY2 324 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 PIH1D2Q8WWB5 315 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 ELSPBP1Q96BH3 223 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 ELMO2Q96JJ3 720 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 PHF7Q9BWX1 381 aaPredicted RBP12.96□□□□□ -0.34
SMAD3-207ENST00000558763 TRIM55Q9BYV6 548 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 EBF3Q9H4W6 596 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 IGSF5Q9NSI5 407 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 POLR3BQ9NW08 1133 aaPredicted RBP12.96□□□□□ -0.34
SMAD3-207ENST00000558763 OBP2AQ9NY56 170 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 DCTN4Q9UJW0 460 aa12.96□□□□□ -0.34
SMAD3-207ENST00000558763 VCANP13611 3396 aa12.95□□□□□ -0.34
SMAD3-207ENST00000558763 NEDD8-MDP1E9PL57 170 aa12.95□□□□□ -0.34
SMAD3-207ENST00000558763 SLC9A3R1O14745 358 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms