RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ZSCAN30Q86W11 494 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 SLC25A45Q8N413 288 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 EID2Q8N6I1 236 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 DENND6BQ8NEG7 585 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 TADA1Q96BN2 335 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 OXNAD1Q96HP4 312 aaPredicted RBP13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 PDLIM2Q96JY6 352 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 TRIB3Q96RU7 358 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 APOOQ9BUR5 198 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 ERVMER34-1Q9H9K5 563 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 USP29Q9HBJ7 922 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 GPR27Q9NS67 375 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 DNAJC28Q9NX36 388 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 TRMT1Q9NXH9 659 aaKnown RBP13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 PCOLCE2Q9UKZ9 415 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 ANKRD11Q6UB99 2663 aaPredicted RBP13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 SPTY2D1-AS1A0A0U1RR47 76 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 CFAP69A5D8W1 941 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 ANKRD66B4E2M5 251 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 PCDHGA12O60330 932 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 CDK18Q07002 472 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 ARHGEF7Q14155 803 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 GSE1Q14687 1217 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 SUZ12Q15022 739 aaKnown RBP13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 AGERQ15109 404 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 TCEA2Q15560 299 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 KCTD19Q17RG1 926 aaPredicted RBP13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 KDELC1Q6UW63 502 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 USP45Q70EL2 814 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 KANSL1Q7Z3B3 1105 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 TECPR1Q7Z6L1 1165 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 CDKL3Q8IVW4 592 aaPredicted RBP13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 RBFAQ8N0V3 343 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 SLC25A41Q8N5S1 370 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 CCDC110Q8TBZ0 833 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 ATG4AQ8WYN0 398 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 SCAMP4Q969E2 229 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 AGAP2Q99490 1192 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 GORASP1Q9BQQ3 440 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 MLPHQ9BV36 600 aaPredicted RBP13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 LGR4Q9BXB1 951 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 C1QTNF7Q9BXJ2 289 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 TLR10Q9BXR5 811 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 ABCG8Q9H221 673 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 SLC32A1Q9H598 525 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 HAUS2Q9NVX0 235 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 RALYQ9UKM9 306 aaKnown RBP13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 SHOC2Q9UQ13 582 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 PCDHGB2Q9Y5G2 931 aa13.84□□□□□ -0.19
TSPAN3-205ENST00000558745 CAPN8A6NHC0 703 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 ENC1O14682 589 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 DFNA5O60443 496 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 TOP3BO95985 862 aaKnown RBP13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 MYF5P13349 255 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 CEACAM1P13688 526 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 DGKAP23743 735 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 CXCR5P32302 372 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 CHRNA4P43681 627 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 ARRB1P49407 418 aaPredicted RBP13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 THOP1P52888 689 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 GDF10P55107 478 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 WNT3AP56704 352 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 SIM1P81133 766 aaPredicted RBP13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 OLIG2Q13516 323 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 C1orf61Q13536 156 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 TRIP6Q15654 476 aaKnown RBP13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 ANKRD20A2Q5SQ80 823 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 ANKRD20A1Q5TYW2 823 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 ANKRD20A3Q5VUR7 823 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 PNCKQ6P2M8 343 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 ENPP7Q6UWV6 458 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 RD3Q7Z3Z2 195 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 PRUNE1Q86TP1 453 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 SLC13A5Q86YT5 568 aaPredicted RBP13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 DCP2Q8IU60 420 aaKnown RBP13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 NDUFAF2Q8N183 169 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 TAB3Q8N5C8 712 aaPredicted RBP13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 PNPLA1Q8N8W4 532 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 C1orf54Q8WWF1 131 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 TSACCQ96A04 125 aaPredicted RBP13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 EID2BQ96D98 161 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 NUS1Q96E22 293 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 DTD2Q96FN9 168 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 IFT43Q96FT9 208 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 MRGPRX2Q96LB1 330 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 ALS2CR12Q96Q35 445 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 FCRL5Q96RD9 977 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 RSPH14Q9UHP6 348 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 DNPEPQ9ULA0 475 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 SPO11Q9Y5K1 396 aa13.83□□□□□ -0.2
TSPAN3-205ENST00000558745 FASNP49327 2511 aaKnown RBP13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 ARID1BQ8NFD5 2236 aaPredicted RBP13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 GOLGA6CA6NDK9 693 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 GOLGA6BA6NDN3 693 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 GOLGA6L9A6NEM1 432 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 TMEM202A6NGA9 273 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 USP27XA6NNY8 438 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 TRIM38O00635 465 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 AURKAO14965 403 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 FFAR2O15552 330 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms