RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 TNFRSF10CO14798 259 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 TEX33O43247 280 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 LRRTM2O43300 516 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 STX10O60499 249 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 DAB1O75553 588 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 KIAA0754O94854 1291 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 EPB41P11171 864 aaKnown RBP11.86□□□□□ -0.51
SMAD3-206ENST00000558739 RPL13P26373 211 aaKnown RBP11.86□□□□□ -0.51
SMAD3-206ENST00000558739 POLD2P49005 469 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 ILF3Q12906 894 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMAD3-206ENST00000558739 RALGDSQ12967 914 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 POLD3Q15054 466 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-206ENST00000558739 AGERQ15109 404 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 ZRSR2Q15696 482 aaKnown RBP11.86□□□□□ -0.51
SMAD3-206ENST00000558739 PASD1Q8IV76 773 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 CEP57L1Q8IYX8 460 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 WDTC1Q8N5D0 677 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 SLC37A2Q8TED4 501 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 PNPLA2Q96AD5 504 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 STAMBPL1Q96FJ0 436 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 GDAP1L1Q96MZ0 367 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 GSDMCQ9BYG8 508 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 ING2Q9H160 280 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 AKIRIN1Q9H9L7 192 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-206ENST00000558739 SUFUQ9UMX1 484 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 PIKFYVEQ9Y2I7 2098 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 ATRQ13535 2644 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 SPTBP11277 2137 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 INPP4BO15327 924 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 BUB1BO60566 1050 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-206ENST00000558739 LETM1O95202 739 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-206ENST00000558739 TIAF1O95411 115 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 ERBB2P04626 1255 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 CEACAM5P06731 702 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 XPAP23025 273 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-206ENST00000558739 MAN1A1P33908 653 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 TRIM23P36406 574 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 PTGIRP43119 386 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 MAPK9P45984 424 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 GFERP55789 205 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 ITGA1P56199 1179 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 GPLD1P80108 840 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 ELP6Q0PNE2 266 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 NFATC2Q13469 925 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 RAPSNQ13702 412 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 CHRNA6Q15825 494 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 UGP2Q16851 508 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 FOXD4L6Q3SYB3 417 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-206ENST00000558739 LRRC31Q6UY01 552 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 FOXD4L3Q6VB84 417 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-206ENST00000558739 ZNF783Q6ZMS7 281 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 FDCSPQ8NFU4 85 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 NCSTNQ92542 709 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 AHCYL2Q96HN2 611 aaKnown RBP11.85□□□□□ -0.51
SMAD3-206ENST00000558739 NT5C1BQ96P26 610 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 NPY6RQ99463 290 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 DPYSL5Q9BPU6 564 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 KLC2Q9H0B6 622 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 WDCPQ9H6R7 721 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 ACSS2Q9NR19 701 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 DNAI1Q9UI46 699 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 LNPEPQ9UIQ6 1025 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 PCDHA7Q9UN72 937 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 PCDHGA6Q9Y5G7 932 aa11.85□□□□□ -0.51
SMAD3-206ENST00000558739 TSPAN11A1L157 253 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 A8MX80 341 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 ZW10O43264 779 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 GLI1P08151 1106 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 KRT5P13647 590 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 KELP23276 732 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 ADCY8P40145 1251 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 ACTR1BP42025 376 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 STAT1P42224 750 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 SULT1E1P49888 294 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 KRTAP10-9P60411 292 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 ACTR1AP61163 376 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 LAMB3Q13751 1172 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 UGT8Q16880 541 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 PLEKHN1Q494U1 663 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-206ENST00000558739 RAB6CQ53S08 254 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 BRMS1LQ5PSV4 323 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 FAM69BQ5VUD6 431 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 WDR74Q6RFH5 385 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-206ENST00000558739 SPNS3Q6ZMD2 512 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 GDF7Q7Z4P5 450 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 GUF1Q8N442 669 aaKnown RBP11.84□□□□□ -0.51
SMAD3-206ENST00000558739 OR10G6Q8NH81 332 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 LMO3Q8TAP4 145 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 FNIP1Q8TF40 1166 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 INPP5DQ92835 1189 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 INTS4Q96HW7 963 aaKnown RBP11.84□□□□□ -0.51
SMAD3-206ENST00000558739 TBCBQ99426 244 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 SLC38A3Q99624 504 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 FRMD8Q9BZ67 464 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-206ENST00000558739 ZYG11BQ9C0D3 744 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 TTYH3Q9C0H2 523 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 RAB6CQ9H0N0 254 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 ASNSD1Q9NWL6 643 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 NEU3Q9UQ49 428 aa11.84□□□□□ -0.51
SMAD3-206ENST00000558739 ATP8A1Q9Y2Q0 1164 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms