RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 HEATR4Q86WZ0 1026 aa11.93□□□□□ -0.5
HERC1-202ENST00000558324 LRRC49Q8IUZ0 686 aa11.93□□□□□ -0.5
HERC1-202ENST00000558324 CACTIN-AS1Q8N1I8 211 aa11.93□□□□□ -0.5
HERC1-202ENST00000558324 TEX26Q8N6G2 289 aa11.93□□□□□ -0.5
HERC1-202ENST00000558324 CCNYQ8ND76 341 aa11.93□□□□□ -0.5
HERC1-202ENST00000558324 SPOCK2Q92563 424 aa11.93□□□□□ -0.5
HERC1-202ENST00000558324 CCDC74AQ96AQ1 378 aa11.93□□□□□ -0.5
HERC1-202ENST00000558324 FAF2Q96CS3 445 aa11.93□□□□□ -0.5
HERC1-202ENST00000558324 DTD2Q96FN9 168 aa11.93□□□□□ -0.5
HERC1-202ENST00000558324 RBM15Q96T37 977 aaKnown RBP eCLIP11.93□□□□□ -0.5
HERC1-202ENST00000558324 TMEM168Q9H0V1 697 aa11.93□□□□□ -0.5
HERC1-202ENST00000558324 RBM22Q9NW64 420 aaKnown RBP eCLIP11.93□□□□□ -0.5
HERC1-202ENST00000558324 MYLKQ15746 1914 aa11.93□□□□□ -0.5
HERC1-202ENST00000558324 SHROOM3Q8TF72 1996 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 LRP4O75096 1905 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 PRSS38A1L453 326 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 MATN3O15232 486 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 KRT1P04264 644 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 HLA-DQB2P05538 268 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 MYCLP1P12525 358 aaPredicted RBP11.92□□□□□ -0.5
HERC1-202ENST00000558324 CCNB1P14635 433 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 HOXB3P14651 431 aaPredicted RBP11.92□□□□□ -0.5
HERC1-202ENST00000558324 KDELR1P24390 212 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 ACTN2P35609 894 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 EIF2S3P41091 472 aaKnown RBP11.92□□□□□ -0.5
HERC1-202ENST00000558324 EPHB1P54762 984 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 CCDC173Q0VFZ6 552 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 SLC10A2Q12908 348 aaPredicted RBP11.92□□□□□ -0.5
HERC1-202ENST00000558324 SPIDRQ14159 915 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 TBC1D25Q3MII6 688 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 LRRC66Q68CR7 880 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 FOXR1Q6PIV2 292 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 DOK6Q6PKX4 331 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 LVRNQ6Q4G3 990 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 LRRC69Q6ZNQ3 347 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 RBM44Q6ZP01 1051 aaKnown RBP11.92□□□□□ -0.5
HERC1-202ENST00000558324 RFLNAQ6ZTI6 216 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 SFTPA2Q8IWL1 248 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 FAM46DQ8NEK8 389 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 LPCAT1Q8NF37 534 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 CCL4L1Q8NHW4 92 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.92□□□□□ -0.5
HERC1-202ENST00000558324 PIH1D2Q8WWB5 315 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 MAML1Q92585 1016 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 SCRN2Q96FV2 425 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 ATXN7L3BQ96GX2 97 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 NAF1Q96HR8 494 aaKnown RBP11.92□□□□□ -0.5
HERC1-202ENST00000558324 ZNF830Q96NB3 372 aaPredicted RBP11.92□□□□□ -0.5
HERC1-202ENST00000558324 MCCC1Q96RQ3 725 aaPredicted RBP11.92□□□□□ -0.5
HERC1-202ENST00000558324 CARS2Q9HA77 564 aaKnown RBP11.92□□□□□ -0.5
HERC1-202ENST00000558324 PHPT1Q9NRX4 125 aaPredicted RBP11.92□□□□□ -0.5
HERC1-202ENST00000558324 DTLQ9NZJ0 730 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 CD84Q9UIB8 345 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 LCMT1Q9UIC8 334 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 RABGEF1Q9UJ41 708 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 SATB2Q9UPW6 733 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 CHKBQ9Y259 395 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 HYOU1Q9Y4L1 999 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 HEY1Q9Y5J3 304 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 DGKBQ9Y6T7 804 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 ADAMTS20P59510 1910 aa11.92□□□□□ -0.5
HERC1-202ENST00000558324 APC2O95996 2303 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 LAMA5O15230 3695 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 PMS2P1A4D2B8 440 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 KCNK1O00180 336 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 RRP8O43159 456 aaKnown RBP11.91□□□□□ -0.5
HERC1-202ENST00000558324 MX2P20592 715 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 CCNCP24863 283 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 TRIM23P36406 574 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 GNPDA1P46926 289 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 CDK3Q00526 305 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 NIPAL4Q0D2K0 466 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 IHHQ14623 411 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 CNGA4Q8IV77 575 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 RHOT2Q8IXI1 618 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 CCDC13Q8IYE1 715 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 NDUFAF2Q8N183 169 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 SDR16C5Q8N3Y7 309 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 Q8N9G6 341 aaPredicted RBP11.91□□□□□ -0.5
HERC1-202ENST00000558324 TPCN2Q8NHX9 752 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 SNIP1Q8TAD8 396 aaKnown RBP11.91□□□□□ -0.5
HERC1-202ENST00000558324 PTCD2Q8WV60 388 aaKnown RBP11.91□□□□□ -0.5
HERC1-202ENST00000558324 FGF11Q92914 225 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 RNF25Q96BH1 459 aaPredicted RBP11.91□□□□□ -0.5
HERC1-202ENST00000558324 HDAC11Q96DB2 347 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 TSGA13Q96PP4 275 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 RNF157Q96PX1 679 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 LGMNQ99538 433 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 TDRD1Q9BXT4 1180 aaKnown RBP11.91□□□□□ -0.5
HERC1-202ENST00000558324 CEP41Q9BYV8 373 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 DPEP2Q9H4A9 486 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 POLR1BQ9H9Y6 1135 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 HAUS2Q9NVX0 235 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 ENTPD2Q9Y5L3 495 aa11.91□□□□□ -0.5
HERC1-202ENST00000558324 CHD6Q8TD26 2715 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 A0A0J9YYE9 177 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 CAPN8A6NHC0 703 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 AKR1B15C9JRZ8 316 aaPredicted RBP11.9□□□□□ -0.5
HERC1-202ENST00000558324 PSMD11O00231 422 aa11.9□□□□□ -0.5
HERC1-202ENST00000558324 AGRPO00253 132 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms