RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 WDR55Q9H6Y2 383 aaPredicted RBP11.78□□□□□ -0.52
CSPG4P12-201ENST00000558282 NT5MQ9NPB1 228 aa11.78□□□□□ -0.52
CSPG4P12-201ENST00000558282 TAS2R14Q9NYV8 317 aa11.78□□□□□ -0.52
CSPG4P12-201ENST00000558282 PDP1Q9P0J1 537 aaPredicted RBP11.78□□□□□ -0.52
CSPG4P12-201ENST00000558282 KCNE2Q9Y6J6 123 aa11.78□□□□□ -0.52
CSPG4P12-201ENST00000558282 TMEM131LA2VDJ0 1609 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 FAM25EA8MYX2 175 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 ULK1O75385 1050 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 NFICP08651 508 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 ATXN8OSP0DMR3 200 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 CD36P16671 472 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 FGFR2P21802 821 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 GLDCP23378 1020 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 MARSP56192 900 aaKnown RBP11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 ZNF177Q13360 481 aaPredicted RBP11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 ADGRG6Q86SQ4 1221 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 SLC41A1Q8IVJ1 513 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 ZNF431Q8TF32 576 aaPredicted RBP11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 SEC14L1Q92503 715 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 ASB9Q96DX5 294 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 PANX3Q96QZ0 392 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 FAM129BQ96TA1 746 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 DCSTAMPQ9H295 470 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 HSPB11Q9Y547 144 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 PCDHB12Q9Y5F1 795 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 CYP7B1O75881 506 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 ALDH1A1P00352 501 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 OTCP00480 354 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 CD72P21854 359 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 MNDAP41218 407 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 RBM34P42696 430 aaKnown RBP11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 SLC11A2P49281 568 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 LIPEQ05469 1076 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 RALGPS1Q5JS13 557 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 REP15Q6BDI9 236 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 OVOS1Q6IE37 1185 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 STYK1Q6J9G0 422 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 ZNF280DQ6N043 979 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 TRIM40Q6P9F5 258 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 SMIM5Q71RC9 77 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 C4orf19Q8IY42 314 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 SELENOMQ8WWX9 145 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 FAM136AQ96C01 138 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 S100A13Q99584 98 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 COPS4Q9BT78 406 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 NLNQ9BYT8 704 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 NXF3Q9H4D5 531 aaKnown RBP11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 ALG2Q9H553 416 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 RASSF1Q9NS23 344 aa11.77□□□□□ -0.52
CSPG4P12-201ENST00000558282 BOLA2-SMG1P6H3BVE0 249 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 DHX15O43143 795 aaKnown RBP11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 OR7A10O76100 309 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 PRKAR2AP13861 404 aaKnown RBP11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 OXCT1P55809 520 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 ST8SIA6P61647 398 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 SLC18A2Q05940 514 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 PPATQ06203 517 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 GET4Q7L5D6 327 aaPredicted RBP11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 TMEM17Q86X19 198 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 FAM20CQ8IXL6 584 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 DNAJB9Q9UBS3 223 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 ZMYM5Q9UJ78 669 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 CPS1P31327 1500 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 DYNC1LI2O43237 492 aaPredicted RBP11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 CDH1P12830 882 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 CD83Q01151 205 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 ZNF181Q2M3W8 571 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 ZNF404Q494X3 552 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 TIGD2Q4W5G0 525 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 ANXA8L1Q5VT79 327 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 CDCA2Q69YH5 1023 aaPredicted RBP11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 ACOT1Q86TX2 421 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 TNS4Q8IZW8 715 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 BANPQ8N9N5 519 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 CREB3L1Q96BA8 519 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 GLT1D1Q96MS3 346 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 RNF157Q96PX1 679 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 ALG5Q9Y673 324 aa11.77□□□□□ -0.53
CSPG4P12-201ENST00000558282 ACOX3O15254 700 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 HBP1O60381 514 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 STAU1O95793 577 aaKnown RBP11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 BMP7P18075 431 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 DGKAP23743 735 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 ITGA3P26006 1051 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 CD97P48960 835 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 MTMR2Q13614 643 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 STXBP5Q5T5C0 1151 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 C1orf189Q5VU69 101 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 PWWP2AQ96N64 755 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 ZNF670Q9BS34 389 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 RHOJQ9H4E5 214 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 KLQ9UEF7 1012 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 KANTRA0A1W2PQU2 76 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 ELOVL7A1L3X0 281 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 A6NHS1 94 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 SNX4O95219 450 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 OR5F1O95221 314 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 IDH3AP50213 366 aa11.76□□□□□ -0.53
CSPG4P12-201ENST00000558282 SLC6A3Q01959 620 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms