RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 KCNMB2Q9Y691 235 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 LRP4O75096 1905 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 RP1L1Q8IWN7 2480 aaPredicted RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 MYO9AB2RTY4 2548 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 LRRK2Q5S007 2527 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 IGHV1OR21-1A0A087WYE8 117 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 PRSS38A1L453 326 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 A1L4Q6 167 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 POLR1CO15160 346 aaPredicted RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 PPM1DO15297 605 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 TEX33O43247 280 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 RAMP2O60895 175 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 SEMA7AO75326 666 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 RFPL1O75677 317 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 RECQL5O94762 991 aaPredicted RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 TMCC1O94876 653 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 FGFR1OPO95684 399 aaKnown RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 RECKO95980 971 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 THRAP10827 490 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 TFE3P19532 575 aaPredicted RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 VARSP26640 1264 aaKnown RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 ERCC5P28715 1186 aaPredicted RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 SCNN1AP37088 669 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 UQCRFS1P47985 274 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 MARSP56192 900 aaKnown RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 BPIFB4P59827 614 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 POLR2LP62875 67 aaKnown RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 NRG1Q02297 640 aaPredicted RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 PNOCQ13519 176 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 MAP7Q14244 749 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 SNAP47Q5SQN1 464 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 OTUD1Q5VV17 481 aaPredicted RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 PNCKQ6P2M8 343 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 LEKR1Q6ZMV7 388 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 TIPARPQ7Z3E1 657 aaKnown RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 FAM131BQ86XD5 332 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 DNAAF5Q86Y56 855 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 UNC5BQ8IZJ1 945 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 CYP4X1Q8N118 509 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 PAF1Q8N7H5 531 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 PLA2G15Q8NCC3 412 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 OR10G6Q8NH81 332 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 SMARCE1Q969G3 411 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 VOPP1Q96AW1 172 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 SLC38A3Q99624 504 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 ZMYND15Q9H091 742 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 CARS2Q9HA77 564 aaKnown RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 FGF22Q9HCT0 170 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 ATP13A2Q9NQ11 1180 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 CASS4Q9NQ75 786 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 PRDM9Q9NQV7 894 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 PHPT1Q9NRX4 125 aaPredicted RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 TMEM248Q9NWD8 314 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 PDP2Q9P2J9 529 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 HOOK1Q9UJC3 728 aaKnown RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 KCND3Q9UK17 655 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 TLK1Q9UKI8 766 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 ATP8A1Q9Y2Q0 1164 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 TMEM184BQ9Y519 407 aaPredicted RBP5.19□□□□□ -1.58
SPG11-208ENST00000558155 RPS6KL1Q9Y6S9 549 aa5.19□□□□□ -1.58
SPG11-208ENST00000558155 BICDL2A1A5D9 508 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 TSPAN11A1L157 253 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 PIPSLA2A3N6 862 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 A8MU76 341 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 BECN2A8MW95 431 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 K7EM74 188 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 INSIG1O15503 277 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 KATNA1O75449 491 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 STK17BO94768 372 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 PLEKP08567 350 aaPredicted RBP5.18□□□□□ -1.58
SPG11-208ENST00000558155 ELFN1P0C7U0 828 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 CCNYL3P0C7X3 344 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 MYCLP1P12525 358 aaPredicted RBP5.18□□□□□ -1.58
SPG11-208ENST00000558155 NR1D1P20393 614 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 BMP6P22004 513 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 AK4P27144 223 aaPredicted RBP5.18□□□□□ -1.58
SPG11-208ENST00000558155 COL8A1P27658 744 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 ADRA1BP35368 520 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 DLSTP36957 453 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 DCTP40126 519 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 GNPDA1P46926 289 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 GABRB2P47870 512 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 YBEYP58557 167 aaPredicted RBP5.18□□□□□ -1.58
SPG11-208ENST00000558155 ERV3-1Q14264 604 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 ACOX1Q15067 660 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 CYTH1Q15438 398 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 EIF2S3LQ2VIR3 472 aaKnown RBP5.18□□□□□ -1.58
SPG11-208ENST00000558155 PTPN20Q4JDL3 420 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 ARTNQ5T4W7 220 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 FAM102AQ5T9C2 384 aaPredicted RBP5.18□□□□□ -1.58
SPG11-208ENST00000558155 AFMIDQ63HM1 303 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 KCTD16Q68DU8 428 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 SLC30A9Q6PML9 568 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 WDR74Q6RFH5 385 aaPredicted RBP5.18□□□□□ -1.58
SPG11-208ENST00000558155 C6orf15Q6UXA7 325 aaPredicted RBP5.18□□□□□ -1.58
SPG11-208ENST00000558155 LIPIQ6XZB0 460 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 GBP6Q6ZN66 633 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 LYSMD3Q7Z3D4 306 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 ARHGAP22Q7Z5H3 698 aa5.18□□□□□ -1.58
SPG11-208ENST00000558155 NLRP14Q86W24 1093 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms