RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 DNAJC1Q96KC8 554 aaKnown RBP16.88■□□□□ 0.29
SNX1-203ENST00000558040 FAM167BQ9BTA0 163 aa16.88■□□□□ 0.29
SNX1-203ENST00000558040 TMEM109Q9BVC6 243 aa16.88■□□□□ 0.29
SNX1-203ENST00000558040 ROPN1BQ9BZX4 212 aaPredicted RBP16.88■□□□□ 0.29
SNX1-203ENST00000558040 ROPN1Q9HAT0 212 aaPredicted RBP16.88■□□□□ 0.29
SNX1-203ENST00000558040 NSMCE4AQ9NXX6 385 aa16.88■□□□□ 0.29
SNX1-203ENST00000558040 ZFATQ9P243 1243 aa16.88■□□□□ 0.29
SNX1-203ENST00000558040 SLC2A6Q9UGQ3 507 aa16.88■□□□□ 0.29
SNX1-203ENST00000558040 KCTD3Q9Y597 815 aa16.88■□□□□ 0.29
SNX1-203ENST00000558040 NFS1Q9Y697 457 aa16.88■□□□□ 0.29
SNX1-203ENST00000558040 IKBKGQ9Y6K9 419 aa16.88■□□□□ 0.29
SNX1-203ENST00000558040 SPTBN5Q9NRC6 3674 aaKnown RBP16.88■□□□□ 0.29
SNX1-203ENST00000558040 GOLGA6L10A6NI86 522 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 FAM159BA6NKW6 160 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 STK25O00506 426 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 BUD23O43709 281 aaKnown RBP16.87■□□□□ 0.29
SNX1-203ENST00000558040 TCEA3O75764 348 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 SASH3O75995 380 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 VAPBO95292 243 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 CLDN7O95471 211 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 MMP12P39900 470 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 P2RY2P41231 377 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 DGKEP52429 567 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 METAP1P53582 386 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 TMPRSS15P98073 1019 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 PTPRRQ15256 657 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 CRY1Q16526 586 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 CDKN3Q16667 212 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 CEP85LQ5SZL2 805 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 ZDHHC20Q5W0Z9 365 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 AFTPHQ6ULP2 937 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 Q6ZS52 159 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 SYT13Q7L8C5 426 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 TSPAN33Q86UF1 283 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 LRRC6Q86X45 466 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 CTAGE3PQ8IX95 158 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 LMNTD2Q8IXW0 634 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 CNPY4Q8N129 248 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 HDDC3Q8N4P3 179 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 OR13C4Q8NGS5 318 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 HDAC10Q969S8 669 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 SIPA1Q96FS4 1042 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 OMDQ99983 421 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 FOXQ1Q9C009 403 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 MKRN2Q9H000 416 aaKnown RBP16.87■□□□□ 0.29
SNX1-203ENST00000558040 CD248Q9HCU0 757 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 RAD18Q9NS91 495 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 IL17CQ9P0M4 197 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 VPS18Q9P253 973 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 SLC24A2Q9UI40 661 aa16.87■□□□□ 0.29
SNX1-203ENST00000558040 TCRBV21S2A2A0A5A6 115 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 A8MX80 341 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 H0Y858 1186 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 PSMD11O00231 422 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 NEMP1O14524 444 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 RASGRF2O14827 1237 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 ERVK-10P10266 1014 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 C7P10643 843 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 ACADMP11310 421 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 LHCGRP22888 699 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 MSH2P43246 934 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 ARCN1P48444 511 aaKnown RBP16.86■□□□□ 0.29
SNX1-203ENST00000558040 PTPN5P54829 565 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 ZXDAP98168 799 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 ZNF844Q08AG5 666 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 CNTN1Q12860 1018 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 GPS2Q13227 327 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 KRT71Q3SY84 523 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 TJAP1Q5JTD0 557 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 TMEM92Q6UXU6 159 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 CACUL1Q86Y37 369 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 AADATQ8N5Z0 425 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 GOLGA6L1Q8N7Z2 621 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 PJA1Q8NG27 643 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 OR6P1Q8NGX9 317 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 GANCQ8TET4 914 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 CDKN2AIPNLQ96HQ2 116 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 MFSD1Q9H3U5 465 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 PKD2L2Q9NZM6 624 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 TXNDC16Q9P2K2 825 aa16.86■□□□□ 0.29
SNX1-203ENST00000558040 MTF2Q9Y483 593 aaPredicted RBP16.86■□□□□ 0.29
SNX1-203ENST00000558040 POC1B-GALNT4F8VUJ3 575 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 H7C0S8 307 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 AREL1O15033 823 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 AP1G1O43747 822 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 OPA1O60313 960 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 RNASEH2AO75792 299 aaKnown RBP16.85■□□□□ 0.29
SNX1-203ENST00000558040 INHBAP08476 426 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 ELFN1P0C7U0 828 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 ARNTP27540 789 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 DRD3P35462 400 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 ARSDP51689 593 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 STC1P52823 247 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 RALGDSQ12967 914 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 PTPRCAPQ14761 206 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 EFTUD2Q15029 972 aaKnown RBP eCLIP16.85■□□□□ 0.297e-14■■■■■ 31
SNX1-203ENST00000558040 HSP90AA5PQ58FG0 334 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 PIP5KL1Q5T9C9 394 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 NEPROQ6NW34 567 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 TRIM67Q6ZTA4 783 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms