RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 CSPG4P5Q96PW8 444 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 GSDMCQ9BYG8 508 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 TMEM168Q9H0V1 697 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 NOD2Q9HC29 1040 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 FGF22Q9HCT0 170 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 AKAP7Q9P0M2 348 aaPredicted RBP13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 B4GALT6Q9UBX8 382 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 PCDHGA7Q9Y5G6 932 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 MGAQ8IWI9 3026 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 LRRK1Q38SD2 2015 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 A0A1W2PNU3 283 aaPredicted RBP13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 A0A1W2PQJ5 194 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 PRSS38A1L453 326 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 MYO1FO00160 1098 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 PSMD11O00231 422 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 MAFKO60675 156 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 PRB1P04280 392 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 SERPING1P05155 500 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 RARAP10276 462 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 SSR1P43307 286 aaKnown RBP13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 SKOR1P84550 965 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 ILF3Q12906 894 aaKnown RBP eCLIP13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 NFKBIBQ15653 356 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 ARMC12Q5T9G4 340 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 DENND2CQ68D51 928 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 CAVIN1Q6NZI2 390 aaKnown RBP13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 JAMLQ86YT9 394 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 NIPA2Q8N8Q9 360 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 SCRN2Q96FV2 425 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 CCNL2Q96S94 520 aaPredicted RBP13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 CMKLR1Q99788 373 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 MGME1Q9BQP7 344 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 LGR4Q9BXB1 951 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 TEX101Q9BY14 249 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 FOXP3Q9BZS1 431 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 MRPL40Q9NQ50 206 aaKnown RBP13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 WDR70Q9NW82 654 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 TRNAU1APQ9NX07 287 aaKnown RBP13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 SEPT10Q9P0V9 454 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 RCOR3Q9P2K3 495 aaPredicted RBP13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 RABGEF1Q9UJ41 708 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 SSUH2Q9Y2M2 353 aa13.62□□□□□ -0.23
SNRPA1-204ENST00000558020 A0A1W2PQM1 296 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 GOLGA6CA6NDK9 693 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 GOLGA6BA6NDN3 693 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 RHPN2P1A8MT19 583 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 B4DGG1 531 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 K7ENP7 123 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 NVLO15381 856 aaKnown RBP13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 HEXIM1O94992 359 aaKnown RBP13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 GOLGA6DP0CG33 693 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 CCNB1P14635 433 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 CR2P20023 1033 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 IL1R2P27930 398 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 SLC5A2P31639 672 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 UGT1A5P35504 534 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 ITKQ08881 620 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 CLPPQ16740 277 aaPredicted RBP13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 TMEM164Q5U3C3 297 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 E4F1Q66K89 784 aaPredicted RBP13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 SPECC1LQ69YQ0 1117 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 INO80CQ6PI98 192 aaPredicted RBP13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 B3GNT8Q7Z7M8 397 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 PIM3Q86V86 326 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 MAP7D3Q8IWC1 876 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 GPBAR1Q8TDU6 330 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 CARS2Q9HA77 564 aaKnown RBP13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 GOLGA6AQ9NYA3 693 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 ANAPC7Q9UJX3 599 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 PCDHB11Q9Y5F2 797 aa13.61□□□□□ -0.23
SNRPA1-204ENST00000558020 ANKRD36A6QL64 1941 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 TTC24A2A3L6 582 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 GOLGA6L19H0YKK7 550 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 NOBOXO60393 691 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 PGLSO95336 258 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 PEX11BO96011 259 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 PYGLP06737 847 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 CA4P22748 312 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 TEAD1P28347 426 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 PDX1P52945 283 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 UBASH3AP57075 661 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 ZBED6P86452 979 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 DPTQ07507 201 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 HLTFQ14527 1009 aaKnown RBP eCLIP13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 IQCB1Q15051 598 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 CNGA3Q16281 694 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 ZSCAN23Q3MJ62 389 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 TIGD7Q6NT04 549 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 SPRED1Q7Z699 444 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 HEATR4Q86WZ0 1026 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 TP53INP2Q8IXH6 220 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 CBARPQ8N350 705 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 PGBD5Q8N414 524 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 ZNF843Q8N446 348 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 DTD2Q96FN9 168 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 NUP85Q9BW27 656 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 POLR1EQ9GZS1 481 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 THAP2Q9H0W7 228 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 PCDH18Q9HCL0 1135 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 ETNK2Q9NVF9 386 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms