RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 LMNB2Q03252 620 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 PARP6Q2NL67 630 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 P3H1Q32P28 736 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 PAPD7Q5XG87 772 aaKnown RBP14.35□□□□□ -0.11
USP3-205ENST00000557884 TTC27Q6P3X3 843 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 DRICH1Q6PGQ1 229 aaPredicted RBP14.35□□□□□ -0.11
USP3-205ENST00000557884 SYT10Q6XYQ8 523 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 KYAT3Q6YP21 454 aaKnown RBP14.35□□□□□ -0.11
USP3-205ENST00000557884 Q6ZSR6 202 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 Q6ZVL8 140 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 LYSMD3Q7Z3D4 306 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 ABI3BPQ7Z7G0 1075 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 MINDY1Q8N5J2 469 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 MFSD2AQ8NA29 543 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 SKA1Q96BD8 255 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 NUS1Q96E22 293 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 KLHDC7BQ96G42 594 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 IL21RQ9HBE5 538 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 TMEM9BQ9NQ34 198 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 HOMER3Q9NSC5 361 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.35□□□□□ -0.11
USP3-205ENST00000557884 CD84Q9UIB8 345 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 DRG1Q9Y295 367 aaKnown RBP14.35□□□□□ -0.11
USP3-205ENST00000557884 AAR2Q9Y312 384 aaKnown RBP14.35□□□□□ -0.11
USP3-205ENST00000557884 SPO11Q9Y5K1 396 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 HS3ST3A1Q9Y663 406 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 SAR1BQ9Y6B6 198 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 TNRC6BQ9UPQ9 1833 aaKnown RBP14.35□□□□□ -0.11
USP3-205ENST00000557884 DNAH14Q0VDD8 3507 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 GOLGA6CA6NDK9 693 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 GOLGA6BA6NDN3 693 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 C4orf47A7E2U8 309 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 FOXD2O60548 495 aaPredicted RBP14.34□□□□□ -0.11
USP3-205ENST00000557884 GOLGA6DP0CG33 693 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 CASQ1P31415 396 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 ACTN2P35609 894 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 NXPH1P58417 271 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 ETF1P62495 437 aaKnown RBP14.34□□□□□ -0.11
USP3-205ENST00000557884 PTSQ03393 145 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 SLC1A5Q15758 541 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 CDKN3Q16667 212 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 HLA-BQ31612 363 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 UAP1L1Q3KQV9 507 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 SPATS2Q86XZ4 545 aaKnown RBP14.34□□□□□ -0.11
USP3-205ENST00000557884 SLC22A18ASQ8N1D0 253 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 PELI3Q8N2H9 469 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 PLA2G15Q8NCC3 412 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 DTD2Q96FN9 168 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 LYSMD1Q96S90 227 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 ZDHHC5Q9C0B5 715 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 GAREM1Q9H706 876 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 GDF3Q9NR23 364 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 GOLGA6AQ9NYA3 693 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 ZNF711Q9Y462 761 aa14.34□□□□□ -0.11
USP3-205ENST00000557884 K7ESM1 405 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 PSMD11O00231 422 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 CDX4O14627 284 aaPredicted RBP14.33□□□□□ -0.12
USP3-205ENST00000557884 AURKAO14965 403 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 EPOP01588 193 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 FGF1P05230 155 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 ZNF30P17039 623 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 HLA-DPA1P20036 260 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 RPL22P35268 128 aaKnown RBP14.33□□□□□ -0.12
USP3-205ENST00000557884 ADRA1AP35348 466 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 RABIFP47224 123 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 IL9RQ01113 521 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 INPP5AQ14642 412 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 TRIP13Q15645 432 aaPredicted RBP14.33□□□□□ -0.12
USP3-205ENST00000557884 TPRG1LQ5T0D9 272 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 STPG1Q5TH74 334 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 TECPR1Q7Z6L1 1165 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 IQCHQ86VS3 1027 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 CREG2Q8IUH2 290 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 CBARPQ8N350 705 aaPredicted RBP14.33□□□□□ -0.12
USP3-205ENST00000557884 PDCD7Q8N8D1 485 aaKnown RBP14.33□□□□□ -0.12
USP3-205ENST00000557884 BLOC1S5Q8TDH9 187 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 C16orf45Q96MC5 204 aaPredicted RBP14.33□□□□□ -0.12
USP3-205ENST00000557884 PPP1R2P1Q96PQ5 205 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 TBL1YQ9BQ87 522 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 GPR63Q9BZJ6 419 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 CAAP1Q9H8G2 361 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 ZFYVE1Q9HBF4 777 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 ETNK1Q9HBU6 452 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 MAGEE1Q9HCI5 957 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 RAB6BQ9NRW1 208 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 PAK5Q9P286 719 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 FNDC3AQ9Y2H6 1198 aaKnown RBP14.33□□□□□ -0.12
USP3-205ENST00000557884 OR1A2Q9Y585 309 aa14.33□□□□□ -0.12
USP3-205ENST00000557884 GOLGA6L10A0A0M3HER8 536 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 MAGEC1O60732 1142 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 PHF2O75151 1096 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 CER1O95813 267 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 COILP38432 576 aaPredicted RBP14.32□□□□□ -0.12
USP3-205ENST00000557884 LMAN1P49257 510 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 VPS41P49754 854 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 TERF1P54274 439 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 PFN3P60673 137 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 OVGP1Q12889 678 aa14.32□□□□□ -0.12
USP3-205ENST00000557884 PDE1CQ14123 709 aaPredicted RBP14.32□□□□□ -0.12
USP3-205ENST00000557884 AGERQ15109 404 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms