RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 AKIRIN1Q9H9L7 192 aaPredicted RBP9.4□□□□□ -0.9
NEDD1-211ENST00000557454 SEMA3GQ9NS98 782 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 ARHGEF38Q9NXL2 777 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 COX16Q9P0S2 106 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 AJAP1Q9UKB5 411 aaPredicted RBP9.4□□□□□ -0.9
NEDD1-211ENST00000557454 ST14Q9Y5Y6 855 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 HS3ST4Q9Y661 456 aa9.4□□□□□ -0.9
NEDD1-211ENST00000557454 PPP1R3GB7ZBB8 358 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 SMAPO00193 183 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 ZMPSTE24O75844 475 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 PLEKP08567 350 aaPredicted RBP9.39□□□□□ -0.91
NEDD1-211ENST00000557454 KELP23276 732 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 MAPK9P45984 424 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 ARF5P84085 180 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 PPP3CAQ08209 521 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 EIF4EBP2Q13542 120 aaPredicted RBP9.39□□□□□ -0.91
NEDD1-211ENST00000557454 LLGL1Q15334 1064 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 KYNUQ16719 465 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 KNOP1Q1ED39 458 aaKnown RBP9.39□□□□□ -0.91
NEDD1-211ENST00000557454 TMEM52BQ4KMG9 183 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 DCAF10Q5QP82 559 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 RETSATQ6NUM9 610 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 TFAP2DQ7Z6R9 452 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 ADAMTS17Q8TE56 1095 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 GRHL3Q8TE85 626 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 CLIC6Q96NY7 704 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 SPON2Q9BUD6 331 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 GPR87Q9BY21 358 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 FAM204AQ9H8W3 233 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 CBX8Q9HC52 389 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 DMAC2Q9NW81 257 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 C5AR2Q9P296 337 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 SUCOQ9UBS9 1254 aaKnown RBP9.39□□□□□ -0.91
NEDD1-211ENST00000557454 LIMCH1Q9UPQ0 1083 aa9.39□□□□□ -0.91
NEDD1-211ENST00000557454 TRBV23OR9-2A0A075B6M9 112 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 GOLGA6L3A6NEY3 463 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 M0QYV0 167 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 SPAG6O75602 509 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 TIAF1O95411 115 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 MT-ND3P03897 115 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 LPOP22079 712 aaPredicted RBP9.38□□□□□ -0.91
NEDD1-211ENST00000557454 CCR1P32246 355 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 KIR3DL1P43629 444 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 GNPDA1P46926 289 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 NASPP49321 788 aaPredicted RBP9.38□□□□□ -0.91
NEDD1-211ENST00000557454 RPS15P62841 145 aaKnown RBP9.38□□□□□ -0.91
NEDD1-211ENST00000557454 TMEM198Q66K66 360 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 LCLAT1Q6UWP7 414 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 GDPD4Q6W3E5 623 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 ZNF765Q7L2R6 523 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 SETD3Q86TU7 594 aaPredicted RBP9.38□□□□□ -0.91
NEDD1-211ENST00000557454 SLC37A2Q8TED4 501 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 TFAP2BQ92481 460 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 SEMA4DQ92854 862 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 TRAPPC9Q96Q05 1148 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 SMR3AQ99954 134 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 OSBPL1AQ9BXW6 950 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 CXXC4Q9H2H0 198 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 WDR26Q9H7D7 661 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 FGF21Q9NSA1 209 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 TMEM63CQ9P1W3 806 aa9.38□□□□□ -0.91
NEDD1-211ENST00000557454 MDC1Q14676 2089 aaKnown RBP9.37□□□□□ -0.91
NEDD1-211ENST00000557454 RASA4BC9J798 803 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 RASA4O43374 803 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 CD160O95971 181 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 FUCA1P04066 466 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 ANKRD34CP0C6C1 535 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 SLC2A3P11169 496 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 VDRP11473 427 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 ADRA1BP35368 520 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 ACTR1BP42025 376 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 FASLGP48023 281 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 SEPHS1P49903 392 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 LIG3P49916 1009 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 VAMP7P51809 220 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 IST1P53990 364 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 GFERP55789 205 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 KCNK10P57789 538 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 ACTR1AP61163 376 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 CTBSQ01459 385 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 Q0VFX4 171 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 C5orf22Q49AR2 442 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 ATXN7L2Q5T6C5 722 aaPredicted RBP9.37□□□□□ -0.91
NEDD1-211ENST00000557454 FAM69BQ5VUD6 431 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 RPTNQ6XPR3 784 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 Q6ZS92 163 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 PELI3Q8N2H9 469 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 PDILTQ8N807 584 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 OR2AP1Q8NGE2 309 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 GOLGA5Q8TBA6 731 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 FAR1Q8WVX9 515 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 HSFY1Q96LI6 401 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 SIK2Q9H0K1 926 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 ATP13A1Q9HD20 1204 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 SLC39A2Q9NP94 309 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 DDIT4Q9NX09 232 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 FBXO2Q9UK22 296 aaPredicted RBP9.37□□□□□ -0.91
NEDD1-211ENST00000557454 CSAG2Q9Y5P2 127 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 SNX10Q9Y5X0 201 aa9.37□□□□□ -0.91
NEDD1-211ENST00000557454 SART1O43290 800 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms