RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 TRIB2Q92519 343 aa17.74■□□□□ 0.43
XRCC3-218ENST00000557439 C19orf60Q96EN9 201 aa17.74■□□□□ 0.43
XRCC3-218ENST00000557439 EXOC2Q96KP1 924 aa17.74■□□□□ 0.43
XRCC3-218ENST00000557439 RPRD1AQ96P16 312 aaPredicted RBP17.74■□□□□ 0.43
XRCC3-218ENST00000557439 TRIM62Q9BVG3 475 aa17.74■□□□□ 0.43
XRCC3-218ENST00000557439 NOL11Q9H8H0 719 aaKnown RBP17.74■□□□□ 0.43
XRCC3-218ENST00000557439 IKZF3Q9UKT9 509 aa17.74■□□□□ 0.43
XRCC3-218ENST00000557439 RAB26Q9ULW5 256 aa17.74■□□□□ 0.43
XRCC3-218ENST00000557439 GABRQQ9UN88 632 aa17.74■□□□□ 0.43
XRCC3-218ENST00000557439 FNDC3AQ9Y2H6 1198 aaKnown RBP17.74■□□□□ 0.43
XRCC3-218ENST00000557439 DNAJC15Q9Y5T4 150 aa17.74■□□□□ 0.43
XRCC3-218ENST00000557439 LAMA2P24043 3122 aaKnown RBP17.73■□□□□ 0.43
XRCC3-218ENST00000557439 CCDC162PA2VCL2 907 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 VILLO15195 856 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 NRP2O60462 931 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 HMBOX1Q6NT76 420 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 NUP93Q8N1F7 819 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 ARHGAP18Q8N392 663 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 NCSTNQ92542 709 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 ZNF512Q96ME7 567 aaPredicted RBP17.73■□□□□ 0.43
XRCC3-218ENST00000557439 CYP2S1Q96SQ9 504 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 MID1IP1Q9NPA3 183 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 PLOD2O00469 737 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 CDK14O94921 469 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 WISP3O95389 354 aaPredicted RBP17.73■□□□□ 0.43
XRCC3-218ENST00000557439 CD1DP15813 335 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 RHOQP17081 205 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 ZNF157P51786 506 aaPredicted RBP17.73■□□□□ 0.43
XRCC3-218ENST00000557439 PTPRRQ15256 657 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 C11orf91Q3C1V1 193 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 UGT3A2Q3SY77 523 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 VPS26BQ4G0F5 336 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 ARMC3Q5W041 872 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 AP1ARQ63HQ0 302 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 MON1AQ86VX9 555 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 TRPC4APQ8TEL6 797 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 DIS3LQ8TF46 1054 aaKnown RBP17.73■□□□□ 0.43
XRCC3-218ENST00000557439 DLG3Q92796 817 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 NSMCE3Q96MG7 304 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 SPAG4Q9NPE6 437 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 EGFL7Q9UHF1 273 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 FAM50BQ9Y247 325 aa17.73■□□□□ 0.43
XRCC3-218ENST00000557439 PIP5K1BO14986 540 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 SLC2A3P11169 496 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 APLP1P51693 650 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 POLD3Q15054 466 aaPredicted RBP17.72■□□□□ 0.43
XRCC3-218ENST00000557439 MYLK3Q32MK0 819 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 RTN4RL1Q86UN2 441 aaPredicted RBP17.72■□□□□ 0.43
XRCC3-218ENST00000557439 DDIASQ8IXT1 998 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 ESAMQ96AP7 390 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 TSPAN17Q96FV3 270 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 MFSD1Q9H3U5 465 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 Q9H521 79 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 UTP6Q9NYH9 597 aaKnown RBP17.72■□□□□ 0.43
XRCC3-218ENST00000557439 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.72■□□□□ 0.43
XRCC3-218ENST00000557439 EPS15L1Q9UBC2 864 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 HCSTQ9UBK5 93 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 SUCOQ9UBS9 1254 aaKnown RBP17.72■□□□□ 0.43
XRCC3-218ENST00000557439 BCAP29Q9UHQ4 241 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 CROTQ9UKG9 612 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 RNF11Q9Y3C5 154 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 A0A0D9SEW6 157 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 SLC12A8A0AV02 714 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 UBA6A0AVT1 1052 aaPredicted RBP17.72■□□□□ 0.43
XRCC3-218ENST00000557439 NCF1BA6NI72 391 aaPredicted RBP17.72■□□□□ 0.43
XRCC3-218ENST00000557439 NCF1CA8MVU1 366 aaPredicted RBP17.72■□□□□ 0.43
XRCC3-218ENST00000557439 SLC7A4O43246 635 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 AP1G1O43747 822 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 TPST1O60507 370 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 LINC00032P0C843 101 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 NCF1P14598 390 aaPredicted RBP17.72■□□□□ 0.43
XRCC3-218ENST00000557439 ATP6V1B2P21281 511 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 GRIA3P42263 894 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 RBBP5Q15291 538 aaKnown RBP17.72■□□□□ 0.43
XRCC3-218ENST00000557439 SLC14A2Q15849 920 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 KCNA10Q16322 511 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 C10orf120Q5SQS8 335 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 SCIMPQ6UWF3 145 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 PPWD1Q96BP3 646 aaKnown RBP17.72■□□□□ 0.43
XRCC3-218ENST00000557439 CCDC126Q96EE4 140 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 MPP4Q96JB8 637 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 TMEM248Q9NWD8 314 aa17.72■□□□□ 0.43
XRCC3-218ENST00000557439 FAM149AA5PLN7 773 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 KIF3CO14782 793 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 CD3EAPO15446 510 aaKnown RBP17.71■□□□□ 0.43
XRCC3-218ENST00000557439 SRP72O76094 671 aaKnown RBP17.71■□□□□ 0.43
XRCC3-218ENST00000557439 IGHA2P01877 340 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 CES1P23141 567 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 OR1E1P30953 314 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 INHBCP55103 352 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 RHDQ02161 417 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 CLLU1OSQ5K130 101 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 DCBLD1Q8N8Z6 715 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 CANT1Q8WVQ1 401 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 C1orf74Q96LT6 269 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 CRISPLD1Q9H336 500 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 TUBB1Q9H4B7 451 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 CD300AQ9UGN4 299 aa17.71■□□□□ 0.43
XRCC3-218ENST00000557439 CNOT6Q9ULM6 557 aaKnown RBP17.71■□□□□ 0.43
XRCC3-218ENST00000557439 SCML2Q9UQR0 700 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms