RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CPLX3Q8WVH0 158 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 LIN37Q96GY3 246 aaPredicted RBP14.19□□□□□ -0.14
SNX6-210ENST00000557341 SLC46A1Q96NT5 459 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 GFM1Q96RP9 751 aaKnown RBP14.19□□□□□ -0.14
SNX6-210ENST00000557341 DPH1Q9BZG8 443 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 NOD2Q9HC29 1040 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 CYP4F12Q9HCS2 524 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 PHPT1Q9NRX4 125 aaPredicted RBP14.19□□□□□ -0.14
SNX6-210ENST00000557341 RABGEF1Q9UJ41 708 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 MOSPD1Q9UJG1 213 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 PHTF1Q9UMS5 762 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 LUC7L2Q9Y383 392 aaKnown RBP14.19□□□□□ -0.14
SNX6-210ENST00000557341 CFAP46Q8IYW2 2715 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 NPIPB15A6NHN6 443 aaPredicted RBP14.18□□□□□ -0.14
SNX6-210ENST00000557341 ATXN7O15265 892 aaPredicted RBP14.18□□□□□ -0.14
SNX6-210ENST00000557341 KLK10O43240 276 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 MFSD11O43934 449 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 RPLP0P05388 317 aaKnown RBP14.18□□□□□ -0.14
SNX6-210ENST00000557341 GLB1P16278 677 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 LHCGRP22888 699 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 EIF3IQ13347 325 aaKnown RBP14.18□□□□□ -0.14
SNX6-210ENST00000557341 ARHGEF7Q14155 803 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 CCDC122Q5T0U0 273 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 ARMC12Q5T9G4 340 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 DENND2CQ68D51 928 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 FOXR1Q6PIV2 292 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 HEATR4Q86WZ0 1026 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 LRRC49Q8IUZ0 686 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 PELI3Q8N2H9 469 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 FAM46DQ8NEK8 389 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 CCDC97Q96F63 343 aaPredicted RBP14.18□□□□□ -0.14
SNX6-210ENST00000557341 DTD2Q96FN9 168 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 PRR11Q96HE9 360 aaPredicted RBP14.18□□□□□ -0.14
SNX6-210ENST00000557341 LGR4Q9BXB1 951 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 TMEM168Q9H0V1 697 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 EPB41L5Q9HCM4 733 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 HAUS2Q9NVX0 235 aa14.18□□□□□ -0.14
SNX6-210ENST00000557341 PMS2P1A4D2B8 440 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 GOLGA6CA6NDK9 693 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 GOLGA6BA6NDN3 693 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 CDRT15L2A8MXV6 281 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 B4DGG1 531 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 TMX2-CTNND1H3BSU7 103 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 TK2O00142 265 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 PGLSO95336 258 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 TPM3P06753 285 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 ITGA2BP08514 1039 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 CD48P09326 243 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 GOLGA6DP0CG33 693 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 KRT10P13645 584 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 GJC1P36383 396 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 ETV3P41162 512 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 GARSP41250 739 aaKnown RBP14.17□□□□□ -0.14
SNX6-210ENST00000557341 SKOR1P84550 965 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 MMRN1Q13201 1228 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 C14orf28Q4W4Y0 310 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 CERCAMQ5T4B2 595 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 NCBP2-AS2Q69YL0 99 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 RAET1GQ6H3X3 334 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 TIGD7Q6NT04 549 aaPredicted RBP14.17□□□□□ -0.14
SNX6-210ENST00000557341 B3GNT8Q7Z7M8 397 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 CLEC14AQ86T13 490 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 CCNJLQ8IV13 435 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 TEX26Q8N6G2 289 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 FAM71BQ8TC56 605 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 KIAA1524Q8TCG1 905 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 SCRN2Q96FV2 425 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 TMEM74Q96NL1 305 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 MCCC1Q96RQ3 725 aaPredicted RBP14.17□□□□□ -0.14
SNX6-210ENST00000557341 ZNF670Q9BS34 389 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 TEX101Q9BY14 249 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 STRADBQ9C0K7 418 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 POLR1EQ9GZS1 481 aaKnown RBP14.17□□□□□ -0.14
SNX6-210ENST00000557341 LRRN3Q9H3W5 708 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 DPEP2Q9H4A9 486 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 NT5MQ9NPB1 228 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 GOLGA6AQ9NYA3 693 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 IFNKQ9P0W0 207 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 APPL1Q9UKG1 709 aa14.17□□□□□ -0.14
SNX6-210ENST00000557341 A0A1W2PQM1 296 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 NOBOXO60393 691 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 TNFSF15O95150 251 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 PNLIPP16233 465 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 IL4RP24394 825 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 TEAD1P28347 426 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 CASP14P31944 242 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 CCKBRP32239 447 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 INHBCP55103 352 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 CCL7P80098 99 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 CDK3Q00526 305 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 GALNT2Q10471 571 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 ILF3Q12906 894 aaKnown RBP eCLIP14.16□□□□□ -0.145e-7■■■□□ 14.9
SNX6-210ENST00000557341 DPYSL3Q14195 570 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 PAFAH1B3Q15102 231 aaKnown RBP14.16□□□□□ -0.14
SNX6-210ENST00000557341 SPECC1LQ69YQ0 1117 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 OGFOD3Q6PK18 319 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 RAB11FIP2Q7L804 512 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 HSD11B1LQ7Z5J1 315 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 NDUFAF2Q8N183 169 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 LSM14AQ8ND56 463 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms