RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 DPEP2Q9H4A9 486 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 NOD2Q9HC29 1040 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.91■□□□□ 0.14
TUBB3-213ENST00000557262 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.91■□□□□ 0.14
TUBB3-213ENST00000557262 LRIT1Q9P2V4 623 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 KIF26BQ2KJY2 2108 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 PRSS38A1L453 326 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 CAPN8A6NHC0 703 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 HEXIM1O94992 359 aaKnown RBP15.9■□□□□ 0.14
TUBB3-213ENST00000557262 CPP00450 1065 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 MYCLP1P12525 358 aaPredicted RBP15.9■□□□□ 0.14
TUBB3-213ENST00000557262 CCKBRP32239 447 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 SERPINB6P35237 376 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 CDH6P55285 790 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 CFHR1Q03591 330 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 ARHGEF7Q14155 803 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 HLTFQ14527 1009 aaKnown RBP eCLIP15.9■□□□□ 0.14
TUBB3-213ENST00000557262 CNGA3Q16281 694 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 C14orf28Q4W4Y0 310 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 TDRD12Q587J7 1177 aaKnown RBP15.9■□□□□ 0.14
TUBB3-213ENST00000557262 CERCAMQ5T4B2 595 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 HGSNATQ68CP4 663 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 TXNRD3NBQ6F5E7 133 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 CAVIN1Q6NZI2 390 aaKnown RBP15.9■□□□□ 0.14
TUBB3-213ENST00000557262 LRRC49Q8IUZ0 686 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 ZNF843Q8N446 348 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 CCL4L1Q8NHW4 92 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 SYN2Q92777 582 aaPredicted RBP15.9■□□□□ 0.14
TUBB3-213ENST00000557262 NUS1Q96E22 293 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 SCRN2Q96FV2 425 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 MGME1Q9BQP7 344 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 TEX101Q9BY14 249 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 FOXP3Q9BZS1 431 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 PCDH18Q9HCL0 1135 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 PHPT1Q9NRX4 125 aaPredicted RBP15.9■□□□□ 0.14
TUBB3-213ENST00000557262 IP6K2Q9UHH9 426 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 PCDHGA7Q9Y5G6 932 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 ANKRD36A6QL64 1941 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 LRP4O75096 1905 aa15.9■□□□□ 0.14
TUBB3-213ENST00000557262 A0A1W2PQJ5 194 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 K7ENP7 123 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 PSMD11O00231 422 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 NUDT21O43809 227 aaKnown RBP15.89■□□□□ 0.13
TUBB3-213ENST00000557262 SLC5A2P31639 672 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 MMP13P45452 471 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 MAXP61244 160 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 ZFP36L1Q07352 338 aaKnown RBP15.89■□□□□ 0.13
TUBB3-213ENST00000557262 TRAF2Q12933 501 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 CLN3Q13286 438 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 DENND2CQ68D51 928 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 SPECC1LQ69YQ0 1117 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 INO80CQ6PI98 192 aaPredicted RBP15.89■□□□□ 0.13
TUBB3-213ENST00000557262 CCDC81Q6ZN84 652 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 HSD11B1LQ7Z5J1 315 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 ZNF605Q86T29 641 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 SFTPA2Q8IWL1 248 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 ATPAF2Q8N5M1 289 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 NIPA2Q8N8Q9 360 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 KIAA1524Q8TCG1 905 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 GPBAR1Q8TDU6 330 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 THAP2Q9H0W7 228 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 CARS2Q9HA77 564 aaKnown RBP15.89■□□□□ 0.13
TUBB3-213ENST00000557262 PPIL1Q9Y3C6 166 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 RNF215Q9Y6U7 377 aa15.89■□□□□ 0.13
TUBB3-213ENST00000557262 B4DGG1 531 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 PGLSO95336 258 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 FUCA1P04066 466 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 SERPING1P05155 500 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 CYP1A2P05177 515 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 CEACAM5P06731 702 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 CCNB1P14635 433 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 IL4RP24394 825 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 ETV3P41162 512 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 B4GALNT1Q00973 533 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 ARMC12Q5T9G4 340 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 Q6ZVL8 140 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 SPRED1Q7Z699 444 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 HEATR4Q86WZ0 1026 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 JAMLQ86YT9 394 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 NDUFAF2Q8N183 169 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 TMEM159Q96B96 161 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 DTD2Q96FN9 168 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 BTBD6Q96KE9 485 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 CCNL2Q96S94 520 aaPredicted RBP15.88■□□□□ 0.13
TUBB3-213ENST00000557262 FUCA2Q9BTY2 467 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 NUP85Q9BW27 656 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 GSDMCQ9BYG8 508 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 SPATS2LQ9NUQ6 558 aaKnown RBP15.88■□□□□ 0.13
TUBB3-213ENST00000557262 TRNAU1APQ9NX07 287 aaKnown RBP15.88■□□□□ 0.13
TUBB3-213ENST00000557262 ANAPC7Q9UJX3 599 aa15.88■□□□□ 0.13
TUBB3-213ENST00000557262 ATXN7L1Q9ULK2 861 aaPredicted RBP15.88■□□□□ 0.13
TUBB3-213ENST00000557262 MYO1FO00160 1098 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 NVLO15381 856 aaKnown RBP15.87■□□□□ 0.13
TUBB3-213ENST00000557262 B4GAT1O43505 415 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 FGF1P05230 155 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 JMJD7P0C870 316 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 KRT10P13645 584 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 HGFP14210 728 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 LHCGRP22888 699 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 TEAD1P28347 426 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms