RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 FUT11Q495W5 492 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 XKR5Q6UX68 686 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 LYSMD3Q7Z3D4 306 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 ISCA2Q86U28 154 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 DDIASQ8IXT1 998 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 C3orf58Q8NDZ4 430 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 DNAJB14Q8TBM8 379 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 DCPSQ96C86 337 aaKnown RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 PAAF1Q9BRP4 392 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 GPATCH1Q9BRR8 931 aaKnown RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 PAIP1Q9H074 479 aaKnown RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 TSPYL2Q9H2G4 693 aaPredicted RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 PIF1Q9H611 641 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 VPS45Q9NRW7 570 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 AGPAT4Q9NRZ5 378 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 MARCH4Q9P2E8 410 aaPredicted RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 CLEC11AQ9Y240 323 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 BTRCQ9Y297 605 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 KCTD3Q9Y597 815 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 ZFC3H1O60293 1989 aaKnown RBP11.4□□□□□ -0.58
SRP54-213ENST00000556994 A0A1W2PPW3 197 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 EI24O14681 340 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 ANGPT2O15123 496 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 INPP4BO15327 924 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 PAGE1O75459 146 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 DDNO94850 711 aaPredicted RBP11.4□□□□□ -0.58
SRP54-213ENST00000556994 LINC00032P0C843 101 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 IMPDH2P12268 514 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 IL10P22301 178 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 FASP25445 335 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 LEPRP48357 1165 aaKnown RBP11.4□□□□□ -0.58
SRP54-213ENST00000556994 PSMD7P51665 324 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 ARSDP51689 593 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 SLC36A3Q495N2 470 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 KCTD21Q4G0X4 260 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 PAN2Q504Q3 1202 aaKnown RBP11.4□□□□□ -0.58
SRP54-213ENST00000556994 DHRS4L2Q6PKH6 230 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 HACD2Q6Y1H2 254 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 TMEM26Q6ZUK4 368 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 FASTKD5Q7L8L6 764 aaKnown RBP11.4□□□□□ -0.58
SRP54-213ENST00000556994 SLC22A9Q8IVM8 553 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 MFSD2AQ8NA29 543 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 GIPC3Q8TF64 312 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 HDAC10Q969S8 669 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 GFM2Q969S9 779 aaKnown RBP11.4□□□□□ -0.58
SRP54-213ENST00000556994 ROPN1LQ96C74 230 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 THAP11Q96EK4 314 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 MID1IP1Q9NPA3 183 aa11.4□□□□□ -0.58
SRP54-213ENST00000556994 A0A1B0GTL3 188 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 RBM47A0AV96 593 aaKnown RBP11.4□□□□□ -0.59
SRP54-213ENST00000556994 SH3PXD2BA1X283 911 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 RRN3P2A6NIE6 340 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 H3BMM5 538 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 H3BMQ9 156 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 FXYD1O00168 92 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 ACOX3O15254 700 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 CLOCKO15516 846 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 CDK14O94921 469 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 SLC6A2P23975 617 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 PSMA4P25789 261 aaKnown RBP11.4□□□□□ -0.59
SRP54-213ENST00000556994 ACADVLP49748 655 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 NAA20P61599 178 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 ECT2LQ008S8 904 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 PTPRCAPQ14761 206 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 RAB39AQ14964 217 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 CYP51A1Q16850 503 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 PFKFB4Q16877 469 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 DUSP28Q4G0W2 176 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 RABL3Q5HYI8 236 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 FGD3Q5JSP0 725 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 PRAMEF19Q5SWL8 479 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 INTS11Q5TA45 600 aaKnown RBP11.4□□□□□ -0.59
SRP54-213ENST00000556994 ANKRD13AQ8IZ07 590 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 CLYBLQ8N0X4 340 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 PTGR2Q8N8N7 351 aaPredicted RBP11.4□□□□□ -0.59
SRP54-213ENST00000556994 SMYD1Q8NB12 490 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 OR13J1Q8NGT2 312 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 MAGEE2Q8TD90 523 aaPredicted RBP11.4□□□□□ -0.59
SRP54-213ENST00000556994 ZUFSPQ96AP4 578 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 VPS33AQ96AX1 596 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 COG8Q96MW5 612 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 KLHL5Q96PQ7 755 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 PPP1R10Q96QC0 940 aaKnown RBP11.4□□□□□ -0.59
SRP54-213ENST00000556994 HIPK3Q9H422 1215 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 RPF2Q9H7B2 306 aaKnown RBP11.4□□□□□ -0.59
SRP54-213ENST00000556994 POLR1BQ9H9Y6 1135 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 MRM3Q9HC36 420 aaKnown RBP11.4□□□□□ -0.59
SRP54-213ENST00000556994 TBC1D13Q9NVG8 400 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 USP22Q9UPT9 525 aa11.4□□□□□ -0.59
SRP54-213ENST00000556994 TTC3P53804 2025 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 ZNF236Q9UL36 1845 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 UBXN8O00124 270 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 ARPC2O15144 300 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 ATP6V1G1O75348 118 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 VARSP26640 1264 aaKnown RBP11.39□□□□□ -0.59
SRP54-213ENST00000556994 TPP2P29144 1249 aaPredicted RBP11.39□□□□□ -0.59
SRP54-213ENST00000556994 CD86P42081 329 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 CASP2P42575 452 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 CCT8P50990 548 aa11.39□□□□□ -0.59
SRP54-213ENST00000556994 CLCN5P51795 746 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms