RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 RHOXF2Q9BQY4 288 aa6.88□□□□□ -1.31
LINC00871-204ENST00000556886 ZBTB26Q9HCK0 441 aa6.88□□□□□ -1.31
LINC00871-204ENST00000556886 TMEM8AQ9HCN3 771 aa6.88□□□□□ -1.31
LINC00871-204ENST00000556886 TRIM36Q9NQ86 728 aa6.88□□□□□ -1.31
LINC00871-204ENST00000556886 ADARB2Q9NS39 739 aaKnown RBP6.88□□□□□ -1.31
LINC00871-204ENST00000556886 PSD3Q9NYI0 1048 aa6.88□□□□□ -1.31
LINC00871-204ENST00000556886 SH3BP4Q9P0V3 963 aa6.88□□□□□ -1.31
LINC00871-204ENST00000556886 SLC9A2Q9UBY0 812 aa6.88□□□□□ -1.31
LINC00871-204ENST00000556886 TTC7AQ9ULT0 858 aaPredicted RBP6.88□□□□□ -1.31
LINC00871-204ENST00000556886 TFR2Q9UP52 801 aa6.88□□□□□ -1.31
LINC00871-204ENST00000556886 RIPK3Q9Y572 518 aa6.88□□□□□ -1.31
LINC00871-204ENST00000556886 CEP83Q9Y592 693 aa6.88□□□□□ -1.31
LINC00871-204ENST00000556886 COX11Q9Y6N1 276 aa6.88□□□□□ -1.31
LINC00871-204ENST00000556886 LOC285556D6RIA3 1793 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 EMSYQ7Z589 1322 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 IGKV6D-21A0A0A0MT36 114 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 COQ9O75208 318 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 SEC31AO94979 1220 aaKnown RBP6.87□□□□□ -1.31
LINC00871-204ENST00000556886 LDHAP00338 332 aaKnown RBP6.87□□□□□ -1.31
LINC00871-204ENST00000556886 SUPT20HL2P0C7V6 817 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 HSPA7P48741 367 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 AARSP49588 968 aaKnown RBP eCLIP6.87□□□□□ -1.31
LINC00871-204ENST00000556886 MXI1P50539 228 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 GPC3P51654 580 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 MFAP3P55082 362 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 PROK1P58294 105 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 ACTR2P61160 394 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 TNNC1P63316 161 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 PPATQ06203 517 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 GPS1Q13098 491 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 NEDD9Q14511 834 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 CASP8Q14790 479 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 UGCGQ16739 394 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 MPEG1Q2M385 716 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 CBWD6Q4V339 395 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 HSP90B2PQ58FF3 399 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 CBWD3Q5JTY5 395 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 CBWD5Q5RIA9 395 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 PPP1R2P3Q6NXS1 205 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 MTHFD1LQ6UB35 978 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 PTCHD4Q6ZW05 846 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 IFT20Q8IY31 132 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 RASGEF1CQ8N431 466 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 LRRC57Q8N9N7 239 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 GLIS1Q8NBF1 620 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 MBD3L2Q8NHZ7 208 aaPredicted RBP6.87□□□□□ -1.31
LINC00871-204ENST00000556886 FAM71BQ8TC56 605 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 CTNNBL1Q8WYA6 563 aaPredicted RBP6.87□□□□□ -1.31
LINC00871-204ENST00000556886 SLC39A13Q96H72 371 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 CAPZA3Q96KX2 299 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 CEP170P1Q96L14 293 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 SNX27Q96L92 541 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 NAP1L3Q99457 506 aaPredicted RBP6.87□□□□□ -1.31
LINC00871-204ENST00000556886 AGPAT1Q99943 283 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 EIF2AQ9BY44 585 aaKnown RBP6.87□□□□□ -1.31
LINC00871-204ENST00000556886 ZCWPW1Q9H0M4 648 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 PCDHAC1Q9H158 963 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 NRBP2Q9NSY0 501 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 GGA3Q9NZ52 723 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 STEAP1Q9UHE8 339 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 ZMYND8Q9ULU4 1186 aaPredicted RBP6.87□□□□□ -1.31
LINC00871-204ENST00000556886 STYXL1Q9Y6J8 313 aa6.87□□□□□ -1.31
LINC00871-204ENST00000556886 MYH10P35580 1976 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 DENND3A2RUS2 1198 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 CCDC169A6NNP5 214 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 MIF4GDA9UHW6 222 aaKnown RBP6.86□□□□□ -1.31
LINC00871-204ENST00000556886 M0R3H8 397 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 SLC16A4O15374 487 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 BUB1O43683 1085 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 RTN2O75298 545 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 PROP1O75360 226 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 JTBO76095 146 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 MTA2O94776 668 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 DDNO94850 711 aaPredicted RBP6.86□□□□□ -1.31
LINC00871-204ENST00000556886 CREB1P16220 341 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 EGR1P18146 543 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 NF2P35240 595 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 NAMPTP43490 491 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 AP3M2P53677 418 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 GALCP54803 685 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 SNRNP35Q16560 246 aaKnown RBP6.86□□□□□ -1.31
LINC00871-204ENST00000556886 TUBB8Q3ZCM7 444 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 DGKKQ5KSL6 1271 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 C1orf220Q5T0J3 134 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 ALS2CLQ60I27 953 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 ABLIM2Q6H8Q1 611 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 MRNIPQ6NTE8 343 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 C8orf74Q6P047 294 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 NFRKBQ6P4R8 1299 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 KIRREL2Q6UWL6 708 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 ZNF677Q86XU0 584 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 ERO1BQ86YB8 467 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 FAM71AQ8IYT1 594 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 GPD1LQ8N335 351 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 FSTL5Q8N475 847 aaPredicted RBP6.86□□□□□ -1.31
LINC00871-204ENST00000556886 ANKRD13CQ8N6S4 541 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 USP38Q8NB14 1042 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 LNX1Q8TBB1 728 aaPredicted RBP6.86□□□□□ -1.31
LINC00871-204ENST00000556886 AFAP1L1Q8TED9 768 aa6.86□□□□□ -1.31
LINC00871-204ENST00000556886 AENQ8WTP8 325 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms