RNA–Protein interactions for RNA: ENST00000556587.5

SRSF5-215, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 1,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-215ENST00000556587 SH2D4BQ5SQS7 431 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 VARS2Q5ST30 1063 aaKnown RBP12.77□□□□□ -0.37
SRSF5-215ENST00000556587 PIK3R6Q5UE93 754 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 ZNF470Q6ECI4 717 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 ELMSAN1Q6PJG2 1045 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 KDELC1Q6UW63 502 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 C16orf89Q6UX73 402 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 RIPOR1Q6ZS17 1223 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 MAVSQ7Z434 540 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 MYLK4Q86YV6 388 aaPredicted RBP12.77□□□□□ -0.37
SRSF5-215ENST00000556587 SLC22A9Q8IVM8 553 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 FSTL5Q8N475 847 aaPredicted RBP12.77□□□□□ -0.37
SRSF5-215ENST00000556587 TEX26Q8N6G2 289 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 FLCNQ8NFG4 579 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 RP9Q8TA86 221 aaKnown RBP12.77□□□□□ -0.37
SRSF5-215ENST00000556587 WDR60Q8WVS4 1066 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 FBXO32Q969P5 355 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 CPSF2Q9P2I0 782 aaKnown RBP12.77□□□□□ -0.37
SRSF5-215ENST00000556587 SLC7A8Q9UHI5 535 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 CDYLQ9Y232 598 aa12.77□□□□□ -0.37
SRSF5-215ENST00000556587 KRBA1A5PL33 1030 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 RGSL1A5PLK6 1076 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 PRR23AA6NEV1 266 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 DRGXA6NNA5 263 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 KRT36O76013 467 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 PENKP01210 267 aaPredicted RBP12.76□□□□□ -0.37
SRSF5-215ENST00000556587 EPOP01588 193 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 COX4I1P13073 169 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 TFEBP19484 476 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 GLDCP23378 1020 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 SLC1A2P43004 574 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 LEPRP48357 1165 aaKnown RBP12.76□□□□□ -0.37
SRSF5-215ENST00000556587 ITKQ08881 620 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 HERC3Q15034 1050 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 SMAD1Q15797 465 aaKnown RBP12.76□□□□□ -0.37
SRSF5-215ENST00000556587 MS4A13Q5J8X5 152 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 TSTD2Q5T7W7 516 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 PRSS55Q6UWB4 352 aaPredicted RBP12.76□□□□□ -0.37
SRSF5-215ENST00000556587 NAPRTQ6XQN6 538 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 SLC41A1Q8IVJ1 513 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 SLC44A3Q8N4M1 653 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 CPSF7Q8N684 471 aaKnown RBP12.76□□□□□ -0.37
SRSF5-215ENST00000556587 ZNF599Q96NL3 588 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 CLSTN3Q9BQT9 956 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 MPP6Q9NZW5 540 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 WNT16Q9UBV4 365 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 PRPF19Q9UMS4 504 aaKnown RBP12.76□□□□□ -0.37
SRSF5-215ENST00000556587 A0A088AWK7 358 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.76□□□□□ -0.37
SRSF5-215ENST00000556587 TARM1B6A8C7 271 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 ANHXE9PGG2 379 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 GOLGA8TH3BQL2 631 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 PHGDHO43175 533 aaKnown RBP12.76□□□□□ -0.37
SRSF5-215ENST00000556587 RAMP2O60895 175 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 LAMP2P13473 410 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 CPB1P15086 417 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 NAGLUP54802 743 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 SESN3P58005 492 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 SATB1Q01826 763 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 BTKQ06187 659 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 GALNT1Q10472 559 aaPredicted RBP12.76□□□□□ -0.37
SRSF5-215ENST00000556587 KLF10Q13118 480 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 CTBP1Q13363 440 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 MSLNQ13421 630 aaPredicted RBP12.76□□□□□ -0.37
SRSF5-215ENST00000556587 BLMHQ13867 455 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 MRPL58Q14197 206 aaKnown RBP12.76□□□□□ -0.37
SRSF5-215ENST00000556587 SLC14A2Q15849 920 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 DDR2Q16832 855 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 C14orf80Q86SX3 495 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 ZNF683Q8IZ20 524 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 CENPLQ8N0S6 344 aaPredicted RBP12.76□□□□□ -0.37
SRSF5-215ENST00000556587 GPATCH11Q8N954 259 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 KCTD4Q8WVF5 259 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 TRMOQ9BU70 441 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 VCXQ9H320 206 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 NT5MQ9NPB1 228 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.76□□□□□ -0.37
SRSF5-215ENST00000556587 NMRK1Q9NWW6 199 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 HACD3Q9P035 362 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 MARCH2Q9P0N8 246 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 GMIPQ9P107 970 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 RIMKLBQ9ULI2 386 aa12.76□□□□□ -0.37
SRSF5-215ENST00000556587 E2F8A0AVK6 867 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 TK2O00142 265 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 PIGNO95427 931 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 PEX11BO96011 259 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 LTA4HP09960 611 aaKnown RBP12.75□□□□□ -0.37
SRSF5-215ENST00000556587 OR4Q2P0C623 313 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 SRFP11831 508 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 ANPEPP15144 967 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 HLA-DPA1P20036 260 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 ARNTP27540 789 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 GABRB3P28472 473 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 ARRB2P32121 409 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 PPARGP37231 505 aaPredicted RBP12.75□□□□□ -0.37
SRSF5-215ENST00000556587 CREMQ03060 361 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 KLC1Q07866 573 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 EFEMP1Q12805 493 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 USP4Q13107 963 aa12.75□□□□□ -0.37
SRSF5-215ENST00000556587 HTR4Q13639 388 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms