RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 SPAG6O75602 509 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 USP1O94782 785 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 PYGLP06737 847 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 PGAM1P18669 254 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 LHCGRP22888 699 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 TERF1P54274 439 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 PTSQ03393 145 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 DPTQ07507 201 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 OLIG2Q13516 323 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 HLTFQ14527 1009 aaKnown RBP eCLIP11.27□□□□□ -0.61
FOXN3-212ENST00000556541 TRADDQ15628 312 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 CNGA3Q16281 694 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 SKIDA1Q1XH10 827 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 USP39Q53GS9 565 aaKnown RBP11.27□□□□□ -0.61
FOXN3-212ENST00000556541 FNBP1LQ5T0N5 605 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 FAM182AQ5T1J6 154 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 TSTD2Q5T7W7 516 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 LRRC66Q68CR7 880 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 PDPK2PQ6A1A2 396 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.27□□□□□ -0.61
FOXN3-212ENST00000556541 GLT6D1Q7Z4J2 308 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 TECPR1Q7Z6L1 1165 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 HORMAD1Q86X24 394 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 LMNTD2Q8IXW0 634 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 CNPY4Q8N129 248 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 SLC25A41Q8N5S1 370 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 PAF1Q8N7H5 531 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 FAM174AQ8TBP5 190 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 COQ10AQ96MF6 247 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 TTC25Q96NG3 672 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 LENG8Q96PV6 779 aaPredicted RBP11.27□□□□□ -0.61
FOXN3-212ENST00000556541 PRRX2Q99811 253 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 EBNA1BP2Q99848 306 aaKnown RBP11.27□□□□□ -0.61
FOXN3-212ENST00000556541 APOL2Q9BQE5 337 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 C1QTNF7Q9BXJ2 289 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 C1QTNF2Q9BXJ5 285 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 FUT8Q9BYC5 575 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 SLC6A17Q9H1V8 727 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 TREX1Q9NSU2 369 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 NLE1Q9NVX2 485 aaPredicted RBP11.27□□□□□ -0.61
FOXN3-212ENST00000556541 PKD2L2Q9NZM6 624 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 SAMD15Q9P1V8 674 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 SPO11Q9Y5K1 396 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 TNRC6BQ9UPQ9 1833 aaKnown RBP11.27□□□□□ -0.61
FOXN3-212ENST00000556541 SPAG17Q6Q759 2223 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 C1orf232A0A0U1RR37 186 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 TOR1BO14657 336 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 SEMA4FO95754 770 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 ALPIP09923 528 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 ELFN1P0C7U0 828 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 MGAT1P26572 445 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 SPINT3P49223 89 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 SESN2P58004 480 aaPredicted RBP11.26□□□□□ -0.61
FOXN3-212ENST00000556541 FAM193AP78312 1265 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 DHX9Q08211 1270 aaKnown RBP11.26□□□□□ -0.61
FOXN3-212ENST00000556541 ILF2Q12905 390 aaKnown RBP11.26□□□□□ -0.61
FOXN3-212ENST00000556541 SPANXN3Q5MJ09 141 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 CERCAMQ5T4B2 595 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 KIAA0930Q6ICG6 404 aaPredicted RBP11.26□□□□□ -0.61
FOXN3-212ENST00000556541 EMBQ6PCB8 327 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 LYSMD3Q7Z3D4 306 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 KDELC2Q7Z4H8 507 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 AGGF1Q8N302 714 aaeCLIP11.26□□□□□ -0.61
FOXN3-212ENST00000556541 PGBD3Q8N328 593 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 ZBTB44Q8NCP5 570 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 OR14C36Q8NHC7 312 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 BLOC1S5Q8TDH9 187 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 CXorf40AQ8TE69 158 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 EID2BQ96D98 161 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 STAMBPL1Q96FJ0 436 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 DTD2Q96FN9 168 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 TXLNGYQ9BZA5 131 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 GPR63Q9BZJ6 419 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 POLR3BQ9NW08 1133 aaPredicted RBP11.26□□□□□ -0.61
FOXN3-212ENST00000556541 SYBUQ9NX95 663 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 APPL1Q9UKG1 709 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 NFU1Q9UMS0 254 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 DMTF1Q9Y222 760 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 HCN4Q9Y3Q4 1203 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 PKP3Q9Y446 797 aa11.26□□□□□ -0.61
FOXN3-212ENST00000556541 PLXNB3Q9ULL4 1909 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 MUC6Q6W4X9 2439 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 CCDC151A5D8V7 595 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 AGAP14A8MT82 685 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 GOLGA8MH3BSY2 632 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 NEMP1O14524 444 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 WNT9AO14904 365 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 STX7O15400 261 aaKnown RBP11.25□□□□□ -0.61
FOXN3-212ENST00000556541 GALR2O43603 387 aaPredicted RBP11.25□□□□□ -0.61
FOXN3-212ENST00000556541 LILRB5O75023 590 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 AVILO75366 819 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 TM7SF2O76062 418 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 CLDN7O95471 211 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 POLBP06746 335 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 C1SP09871 688 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 C6P13671 934 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 CTPS1P17812 591 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 GM2AP17900 193 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 PAMP19021 973 aa11.25□□□□□ -0.61
FOXN3-212ENST00000556541 ACSL1P33121 698 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms