RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 SLC26A1Q9H2B4 701 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 EPC1Q9H2F5 836 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 PPA2Q9H2U2 334 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 METTL8Q9H825 291 aaKnown RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 RMND5AQ9H871 391 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 SIAEQ9HAT2 523 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 KCNK12Q9HB15 430 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 TREM1Q9NP99 234 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 ZNF275Q9NSD4 429 aaPredicted RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 NCKIPSDQ9NZQ3 722 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 GRHPRQ9UBQ7 328 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 MAN1B1Q9UKM7 699 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 TNFSF13BQ9Y275 285 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 PPP2R2CQ9Y2T4 447 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 ASB4Q9Y574 426 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 RAD54BQ9Y620 910 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 KCNE2Q9Y6J6 123 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 KDM6AO15550 1401 aaPredicted RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 ARHGEF11O15085 1522 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 CDK13Q14004 1512 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 KDM5BQ9UGL1 1544 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 A0A1W2PQ72 361 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 NUDT19A8MXV4 375 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 E9PAM4 449 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 PRR23D1E9PI22 279 aaPredicted RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 H0Y8G0 127 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 H3BNX3 289 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 POLRMTO00411 1230 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 RRP8O43159 456 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 AKR7A2O43488 359 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 KCNQ3O43525 872 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 DYRK3O43781 588 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 SLC25A17O43808 307 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 MAGEC1O60732 1142 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 SCAF4O95104 1147 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 POMCP01189 267 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 LRG1P02750 347 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 FUCA1P04066 466 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 FABP1P07148 127 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 FHP07954 510 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 STSP08842 583 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 GNAO1P09471 354 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 OR4E1P0C645 316 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 STAG3L3P0CL85 134 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 PRR23D2P0DMB1 279 aaPredicted RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 CYP19A1P11511 503 aaPredicted RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 WARSP23381 471 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 ITGB8P26012 769 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 CHRNA5P30532 468 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 RCVRNP35243 200 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 CYLC1P35663 651 aaPredicted RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 HMGCLP35914 325 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 ARL1P40616 181 aaPredicted RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 KIR3DL1P43629 444 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 KIR3DL2P43630 455 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 PIK3CGP48736 1102 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 CPT1AP50416 773 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 RAB13P51153 203 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 RIDAP52758 137 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 BCAR1P56945 870 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 NCALDP61601 193 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 YWHAHQ04917 246 aaPredicted RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 SLC34A1Q06495 639 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 TOP3AQ13472 1001 aaPredicted RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 SQSTM1Q13501 440 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 ATP1A4Q13733 1029 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 TOB2Q14106 344 aaPredicted RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 STAT4Q14765 748 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 EMC2Q15006 297 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 PON3Q15166 354 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 SEC23AQ15436 765 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 KCNA10Q16322 511 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 KYAT1Q16773 422 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 CA9Q16790 459 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 EIF2S3LQ2VIR3 472 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 TRIM16LQ309B1 348 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 SLC9B1Q4ZJI4 515 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 C2CD6Q53TS8 623 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 GPR158Q5T848 1215 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 RESP18Q5W5W9 173 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 KRT79Q5XKE5 535 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 DENND5AQ6IQ26 1287 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 RPUSD3Q6P087 351 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 VITQ6UXI7 678 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 LINC00299Q6ZSB3 139 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 GPRIN3Q6ZVF9 776 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 HAUS6Q7Z4H7 955 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 DCXRQ7Z4W1 244 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 PIGWQ7Z7B1 504 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 RNF180Q86T96 592 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 CREG2Q8IUH2 290 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 CYP4Z2PQ8N1L4 340 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 HDDC3Q8N4P3 179 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 MREGQ8N565 214 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 SRBD1Q8N5C6 995 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 SH2D3CQ8N5H7 860 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 CELF5Q8N6W0 485 aaKnown RBP6.21□□□□□ -1.42
TDP1-215ENST00000556498 USHBP1Q8N6Y0 703 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 ZNF781Q8N8C0 355 aa6.21□□□□□ -1.42
TDP1-215ENST00000556498 FNDC5Q8NAU1 212 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms