RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ENC1O14682 589 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 MTSS1O43312 755 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 HYAL3O43820 417 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-205ENST00000556310 LDOC1O95751 146 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-205ENST00000556310 TRBC1P01850 177 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 APOC2P02655 101 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 MMP2P08253 660 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 CTPS1P17812 591 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 HTR1BP28222 390 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 CD86P42081 329 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 EPHB1P54762 984 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 RWDD2BP57060 319 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 SKOR1P84550 965 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 EIF2B5Q13144 721 aaKnown RBP11.55□□□□□ -0.56
SLIRP-205ENST00000556310 ARHGEF7Q14155 803 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 INPP5AQ14642 412 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 NFATC4Q14934 902 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 ACOX1Q15067 660 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 LLGL1Q15334 1064 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 SLC14A2Q15849 920 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 ZNF542PQ5EBM4 170 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 ESRP1Q6NXG1 681 aaKnown RBP11.55□□□□□ -0.56
SLIRP-205ENST00000556310 SLCO6A1Q86UG4 719 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 NT5DC3Q86UY8 548 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 SPNS2Q8IVW8 549 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 PHACTR4Q8IZ21 702 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 SYCE1Q8N0S2 351 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 OR4C6Q8NH72 309 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 ATL2Q8NHH9 583 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 TFB1MQ8WVM0 346 aaKnown RBP11.55□□□□□ -0.56
SLIRP-205ENST00000556310 BTN2A2Q8WVV5 523 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 NUS1Q96E22 293 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 DTD2Q96FN9 168 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 IMP4Q96G21 291 aaKnown RBP11.55□□□□□ -0.56
SLIRP-205ENST00000556310 TBATAQ96M53 351 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 QKIQ96PU8 341 aaKnown RBP eCLIP11.55□□□□□ -0.56
SLIRP-205ENST00000556310 SCNM1Q9BWG6 230 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 CEP41Q9BYV8 373 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 PCDH9Q9HC56 1237 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 UCKL1Q9NWZ5 548 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 SAE1Q9UBE0 346 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-205ENST00000556310 TRIM10Q9UDY6 481 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 APOBEC3BQ9UH17 382 aaKnown RBP11.55□□□□□ -0.56
SLIRP-205ENST00000556310 KLF15Q9UIH9 416 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 CHKBQ9Y259 395 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 EFR3BQ9Y2G0 817 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 PCDHB3Q9Y5E6 796 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 MAP1BP46821 2468 aaKnown RBP11.55□□□□□ -0.56
SLIRP-205ENST00000556310 IGF2RP11717 2491 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 EPG5Q9HCE0 2579 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 A0A0U1RQJ8 604 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 NEMP2A6NFY4 417 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 MIF4GDA9UHW6 222 aaKnown RBP11.54□□□□□ -0.56
SLIRP-205ENST00000556310 HACD1B0YJ81 288 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 TRIM38O00635 465 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 ARHGAP6O43182 974 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 TOP3BO95985 862 aaKnown RBP11.54□□□□□ -0.56
SLIRP-205ENST00000556310 PRLP01236 227 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 ALPIP09923 528 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 GIMD1P0DJR0 217 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 ALPPL2P10696 532 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 ZNF30P17039 623 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 JUNDP17535 347 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 PTPN3P26045 913 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 HNF1BP35680 557 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 CETN2P41208 172 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 KIAA1024LP59773 190 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 ZNF211Q13398 564 aaPredicted RBP11.54□□□□□ -0.56
SLIRP-205ENST00000556310 TEX44Q53QW1 395 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 HS1BP3Q53T59 392 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 LRRC66Q68CR7 880 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 PEX26Q7Z412 305 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 HSD11B1LQ7Z5J1 315 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 TSPAN33Q86UF1 283 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 RBFAQ8N0V3 343 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 CBARPQ8N350 705 aaPredicted RBP11.54□□□□□ -0.56
SLIRP-205ENST00000556310 PNPLA1Q8N8W4 532 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 PLA2G15Q8NCC3 412 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 LPCAT1Q8NF37 534 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 ALG3Q92685 438 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 HAUS1Q96CS2 278 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 WDR92Q96MX6 357 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 AGAP3Q96P47 875 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 LYSMD1Q96S90 227 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 APOOQ9BUR5 198 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 HEMGNQ9BXL5 484 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 OSBPL8Q9BZF1 889 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 TSGA10Q9BZW7 698 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 SLC25A51Q9H1U9 297 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 WDR26Q9H7D7 661 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 CAAP1Q9H8G2 361 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 NLGN3Q9NZ94 848 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 AMFRQ9UKV5 643 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 NEUROG3Q9Y4Z2 214 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 OR1A2Q9Y585 309 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 PCDHGA1Q9Y5H4 931 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 CSNK1G3Q9Y6M4 447 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 SCN8AQ9UQD0 1980 aa11.54□□□□□ -0.56
SLIRP-205ENST00000556310 CACNB4O00305 520 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-205ENST00000556310 SCAMP1O15126 338 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms