RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 MAN1C1Q9NR34 630 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 VPS28Q9UK41 221 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 A0A1B0GVM2 712 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 LOC285095A0A1B0GVY8 99 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 TCAF2A6NFQ2 919 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 HIDE1A8MVS5 230 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 CXCL14O95715 111 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 MPOP05164 745 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 STMN1P16949 149 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 ARF5P84085 180 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 CSHL1Q14406 222 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 CYTH1Q15438 398 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 LRRC36Q1X8D7 754 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 MAVSQ7Z434 540 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 TCEAL8Q8IYN2 117 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 FSTL5Q8N475 847 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-212ENST00000554467 LPCAT1Q8NF37 534 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 SKA1Q96BD8 255 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 NSL1Q96IY1 281 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 CORO1BQ9BR76 489 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 ARNT2Q9HBZ2 717 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 BPIFA1Q9NP55 256 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 TAS2R1Q9NYW7 299 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 XPR1Q9UBH6 696 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 PCDHB12Q9Y5F1 795 aa11.72□□□□□ -0.53
SHMT2-212ENST00000554467 GPR39O43194 453 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 SERPINE1P05121 402 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 CCDC166P0CW27 439 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 GKP32189 559 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 PGM1P36871 562 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 PLK1P53350 603 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 RAB10P61026 200 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 HPCAP84074 193 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 FRG1Q14331 258 aaKnown RBP11.71□□□□□ -0.53
SHMT2-212ENST00000554467 SEMA3AQ14563 771 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 ZNF781Q8N8C0 355 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 FBXO27Q8NI29 283 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 ISL2Q96A47 359 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 TTC1Q99614 292 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 CYP4F12Q9HCS2 524 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 SEPT3Q9UH03 358 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 ACOT9Q9Y305 439 aa11.71□□□□□ -0.53
SHMT2-212ENST00000554467 KDELR3O43731 214 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 RFPL2O75678 378 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 TGDSO95455 350 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 VARSP26640 1264 aaKnown RBP11.71□□□□□ -0.54
SHMT2-212ENST00000554467 SLC12A2P55011 1212 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 ERVFC1P60507 584 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 PLPP4Q5VZY2 271 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 CNTN4Q8IWV2 1026 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 CMTR2Q8IYT2 770 aaKnown RBP11.71□□□□□ -0.54
SHMT2-212ENST00000554467 TMEM199Q8N511 208 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 SHKBP1Q8TBC3 707 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 MIPOL1Q8TD10 442 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 OVCA2Q8WZ82 227 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 BADQ92934 168 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 ECSITQ9BQ95 431 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 THTPAQ9BU02 230 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 SCUBE2Q9NQ36 999 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 TLR9Q9NR96 1032 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 CFAP97Q9P2B7 532 aa11.71□□□□□ -0.54
SHMT2-212ENST00000554467 ANKRD12Q6UB98 2062 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 CCDC162PA2VCL2 907 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 MROH6A6NGR9 719 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 TMCC1O94876 653 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 CD160O95971 181 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 GOT2P00505 430 aaKnown RBP11.7□□□□□ -0.54
SHMT2-212ENST00000554467 CSKP41240 450 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 CDKN1CP49918 316 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-212ENST00000554467 NAGLUP54802 743 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 CDKN2DP55273 166 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 INSCQ1MX18 579 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 SPDYAQ5MJ70 313 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 KLHDC10Q6PID8 442 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 TREML1Q86YW5 311 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 BBS7Q8IWZ6 715 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 APCDD1Q8J025 514 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 TMEM151AQ8N4L1 468 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 POU5F2Q8N7G0 328 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 CCNYL1Q8N7R7 359 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 DDI1Q8WTU0 396 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 HEXDCQ8WVB3 486 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 CCDC124Q96CT7 223 aaKnown RBP11.7□□□□□ -0.54
SHMT2-212ENST00000554467 TMA16Q96EY4 203 aaKnown RBP11.7□□□□□ -0.54
SHMT2-212ENST00000554467 TRMT2BQ96GJ1 504 aaKnown RBP11.7□□□□□ -0.54
SHMT2-212ENST00000554467 PSKH2Q96QS6 385 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 GATA5Q9BWX5 397 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-212ENST00000554467 PRKD2Q9BZL6 878 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 FAM96AQ9H5X1 160 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 SAR1AQ9NR31 198 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 PRUNE2Q8WUY3 3088 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 VILLO15195 856 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 INSIG1O15503 277 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 BNIP3LO60238 219 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 HSPA4LO95757 839 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 C8AP07357 584 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 SYN1P17600 705 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 LBX1P52954 281 aa11.7□□□□□ -0.54
SHMT2-212ENST00000554467 ABCE1P61221 599 aaKnown RBP11.7□□□□□ -0.54
SHMT2-212ENST00000554467 SEMG2Q02383 582 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms