RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 HAUS2Q9NVX0 235 aa5.4□□□□□ -1.54
MTHFD1-206ENST00000554353 MTMR4Q9NYA4 1195 aa5.4□□□□□ -1.54
MTHFD1-206ENST00000554353 CGNQ9P2M7 1197 aaKnown RBP5.4□□□□□ -1.54
MTHFD1-206ENST00000554353 PI4KBQ9UBF8 816 aa5.4□□□□□ -1.54
MTHFD1-206ENST00000554353 LPAR3Q9UBY5 353 aa5.4□□□□□ -1.54
MTHFD1-206ENST00000554353 GDAQ9Y2T3 454 aa5.4□□□□□ -1.54
MTHFD1-206ENST00000554353 HS3ST3A1Q9Y663 406 aa5.4□□□□□ -1.54
MTHFD1-206ENST00000554353 COL4A3Q01955 1670 aa5.4□□□□□ -1.55
MTHFD1-206ENST00000554353 COL2A1P02458 1487 aaPredicted RBP5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 FRMPD3Q5JV73 1810 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 A0A0U1RQJ8 604 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 GRID2IPA4D2P6 1211 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 SMCO2A6NFE2 343 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 PGPEP1LA6NFU8 196 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 KCNJ18B7U540 433 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 QSOX1O00391 747 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 KIAA0355O15063 1070 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 ZSCAN12O43309 604 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 SPRY2O43597 315 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 ASNSP08243 561 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 CCDC175P0C221 793 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 OR52Z1P0C646 297 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 PDHBP11177 359 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 P4HA1P13674 534 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 H2AFXP16104 143 aaPredicted RBP5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 CAPN2P17655 700 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 ADRA1BP35368 520 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 STAT6P42226 847 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 GSTM5P46439 218 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 NAPAP54920 295 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 POLE2P56282 527 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 BACE1P56817 501 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 SPAG1Q07617 926 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 ORC2Q13416 577 aaPredicted RBP5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 TRPC3Q13507 836 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 BFSP2Q13515 415 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 CSHL1Q14406 222 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 KCNJ12Q14500 433 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 ACOX1Q15067 660 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 NONOQ15233 471 aaKnown RBP eCLIP5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 ST3GAL2Q16842 350 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 SHROOM1Q2M3G4 852 aaPredicted RBP5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 ERCC6LQ2NKX8 1250 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 ZXDCQ2QGD7 858 aaPredicted RBP5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 BTBD16Q32M84 506 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 TCP11X2Q5H9J9 407 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 ATPAF1Q5TC12 328 aaPredicted RBP5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 TTI2Q6NXR4 508 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 C16orf87Q6PH81 154 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 CRIP3Q6Q6R5 217 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 Q6ZWC4 215 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 USP51Q70EK9 711 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 ZNF627Q7L945 461 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 EPHX4Q8IUS5 362 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 ZNF397Q8NF99 534 aaPredicted RBP5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 WDYHV1Q96HA8 205 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 CNDP2Q96KP4 475 aaKnown RBP5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 MTMR9Q96QG7 549 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 CTAGE1Q96RT6 745 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 PIGSQ96S52 555 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 PAIP2Q9BPZ3 127 aaKnown RBP5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 RTKNQ9BST9 563 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 DESI2Q9BSY9 194 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 BRD8Q9H0E9 1235 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 PRO3102Q9H379 93 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 CUEDC2Q9H467 287 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 RMND1Q9NWS8 449 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 DLL3Q9NYJ7 618 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 TAB2Q9NYJ8 693 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 VPS28Q9UK41 221 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 STX8Q9UNK0 236 aa5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 MTF2Q9Y483 593 aaPredicted RBP5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 V9GYY5 206 aaPredicted RBP5.39□□□□□ -1.55
MTHFD1-206ENST00000554353 SMCHD1A6NHR9 2005 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 CUL9Q8IWT3 2517 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 SYNJ2BP-COX16A0A087WUM0 186 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 C17orf113A0A1B0GUU1 675 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 CCDC151A5D8V7 595 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 TRIM49BA6NDI0 452 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 GOLGA6L9A6NEM1 432 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 CBFA2T3O75081 653 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 SLC4A1P02730 911 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 MT-ND3P03897 115 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 KRT13P13646 458 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 TNFRSF1AP19438 455 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 CYP2B6P20813 491 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 PCSK6P29122 969 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 GNA11P29992 359 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 ATP5DP30049 168 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 HOXA7P31268 230 aaPredicted RBP5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 CASP14P31944 242 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 SHMT1P34896 483 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 CCT6AP40227 531 aaKnown RBP5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 PRKAA2P54646 552 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 CSE1LP55060 971 aaKnown RBP5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 AP2B1P63010 937 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 CBX1P83916 185 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 TLE2Q04725 743 aa5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 MRPL28Q13084 256 aaKnown RBP5.38□□□□□ -1.55
MTHFD1-206ENST00000554353 MTAPQ13126 283 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms