RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 ERN1O75460 977 aaKnown RBP6.17□□□□□ -1.42
ATXN3-223ENST00000553686 SLITRK3O94933 977 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 SNUPNO95149 360 aaKnown RBP6.17□□□□□ -1.42
ATXN3-223ENST00000553686 TDP2O95551 362 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 HKR1P10072 659 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 ITGAMP11215 1152 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 ACADMP11310 421 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 ODC1P11926 461 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 NAMPTP43490 491 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 RECQLP46063 649 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-223ENST00000553686 AVPR1BP47901 424 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 AARSP49588 968 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-223ENST00000553686 OSTNP61366 133 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 RPL10AP62906 217 aaKnown RBP6.17□□□□□ -1.42
ATXN3-223ENST00000553686 KDSRQ06136 332 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 ST3GAL1Q11201 340 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 ZSCAN23Q3MJ62 389 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 APOA5Q6Q788 366 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 MAEAQ7L5Y9 396 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 TTC7BQ86TV6 843 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 TICAM1Q8IUC6 712 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 EID2Q8N6I1 236 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 LRRC15Q8TF66 581 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 SNX19Q92543 992 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 NACC2Q96BF6 587 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 ZG16BQ96DA0 208 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 OTUB2Q96DC9 234 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 SGF29Q96ES7 293 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 GABRG3Q99928 467 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 TCHPQ9BT92 498 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 ZCWPW1Q9H0M4 648 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 TM9SF3Q9HD45 589 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 GEMIN8Q9NWZ8 242 aaKnown RBP6.17□□□□□ -1.42
ATXN3-223ENST00000553686 GCNT4Q9P109 453 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 TESQ9UGI8 421 aaKnown RBP6.17□□□□□ -1.42
ATXN3-223ENST00000553686 EPN1Q9Y6I3 576 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-223ENST00000553686 FBN3Q75N90 2809 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 ATG2BQ96BY7 2078 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 VPS37CA5D8V6 355 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-223ENST00000553686 K7ERI5 159 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 ADAMTS3O15072 1205 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 USO1O60763 962 aaKnown RBP6.16□□□□□ -1.42
ATXN3-223ENST00000553686 HAUS5O94927 633 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 AGFG2O95081 481 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 BAG4O95429 457 aaKnown RBP6.16□□□□□ -1.42
ATXN3-223ENST00000553686 MCF2P10911 925 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 CYP3A5P20815 502 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 LRPAP1P30533 357 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 ARRB1P49407 418 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-223ENST00000553686 RARRES1P49788 294 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 TPMTP51580 245 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 BLOC1S1P78537 153 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 IL9RQ01113 521 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 DSC2Q02487 901 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 COL10A1Q03692 680 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 E2F5Q15329 346 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 CYP2A13Q16696 494 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 KHDC1Q4VXA5 237 aaKnown RBP6.16□□□□□ -1.42
ATXN3-223ENST00000553686 ZC2HC1CQ53FD0 456 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-223ENST00000553686 NCAPH2Q6IBW4 605 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-223ENST00000553686 GATAD2AQ86YP4 633 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 FAM177A1Q8N128 213 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-223ENST00000553686 TERB1Q8NA31 727 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 ZNF564Q8TBZ8 553 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-223ENST00000553686 SCFD1Q8WVM8 642 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 LINC00476Q8WZB0 136 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 PRCCQ92733 491 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-223ENST00000553686 HPS3Q969F9 1004 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 GRAMD1AQ96CP6 724 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 SIPA1Q96FS4 1042 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 IFT74Q96LB3 600 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 SENP8Q96LD8 212 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 COQ10AQ96MF6 247 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 SLC22A12Q96S37 553 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 VRK1Q99986 396 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-223ENST00000553686 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.16□□□□□ -1.42
ATXN3-223ENST00000553686 PLEKHA5Q9HAU0 1116 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 KCNE5Q9UJ90 142 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 ANAPC2Q9UJX6 822 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 CFAP20Q9Y6A4 193 aaKnown RBP6.16□□□□□ -1.42
ATXN3-223ENST00000553686 VWA8A3KMH1 1905 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 PCDH15Q96QU1 1955 aa6.16□□□□□ -1.42
ATXN3-223ENST00000553686 SPTBN1Q01082 2364 aaKnown RBP6.16□□□□□ -1.42
ATXN3-223ENST00000553686 ITPR2Q14571 2701 aa6.15□□□□□ -1.42
ATXN3-223ENST00000553686 TLN1Q9Y490 2541 aaKnown RBP6.15□□□□□ -1.42
ATXN3-223ENST00000553686 NPC1O15118 1278 aa6.15□□□□□ -1.42
ATXN3-223ENST00000553686 VILLO15195 856 aa6.15□□□□□ -1.42
ATXN3-223ENST00000553686 HOXC11O43248 304 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-223ENST00000553686 PRPF3O43395 683 aaKnown RBP6.15□□□□□ -1.42
ATXN3-223ENST00000553686 SYNCRIPO60506 623 aaKnown RBP6.15□□□□□ -1.42
ATXN3-223ENST00000553686 TULP3O75386 442 aa6.15□□□□□ -1.42
ATXN3-223ENST00000553686 NOL4O94818 638 aa6.15□□□□□ -1.42
ATXN3-223ENST00000553686 ZRANB2O95218 330 aaKnown RBP eCLIP6.15□□□□□ -1.42
ATXN3-223ENST00000553686 IGLV3-19P01714 112 aa6.15□□□□□ -1.42
ATXN3-223ENST00000553686 GCFC2P16383 781 aaKnown RBP6.15□□□□□ -1.42
ATXN3-223ENST00000553686 ACP1P24666 158 aa6.15□□□□□ -1.42
ATXN3-223ENST00000553686 CD27P26842 260 aa6.15□□□□□ -1.42
ATXN3-223ENST00000553686 PI4KAP42356 2102 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms