RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 TRABDQ9H4I3 376 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 SPATA6Q9NWH7 488 aaPredicted RBP9.78□□□□□ -0.84
CHD8-204ENST00000553622 IL1RAPL1Q9NZN1 696 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 SLC2A6Q9UGQ3 507 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 SPAG17Q6Q759 2223 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 RIPK2O43353 540 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 PI15O43692 258 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 LZTS3O60299 673 aaPredicted RBP9.77□□□□□ -0.85
CHD8-204ENST00000553622 MMP20O60882 483 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 USP1O94782 785 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 APBB3O95704 486 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 TTC4O95801 387 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 H2AFXP16104 143 aaPredicted RBP9.77□□□□□ -0.85
CHD8-204ENST00000553622 LHCGRP22888 699 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 HSD17B3P37058 310 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 MMP12P39900 470 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 RPS9P46781 194 aaKnown RBP9.77□□□□□ -0.85
CHD8-204ENST00000553622 CXCL12P48061 93 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 PXNP49023 591 aaPredicted RBP9.77□□□□□ -0.85
CHD8-204ENST00000553622 LIG3P49916 1009 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 SUOXP51687 545 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 ZNF140P52738 457 aaPredicted RBP9.77□□□□□ -0.85
CHD8-204ENST00000553622 PDE1BQ01064 536 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 ZBTB16Q05516 673 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 RALGDSQ12967 914 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 MSLNQ13421 630 aaPredicted RBP9.77□□□□□ -0.85
CHD8-204ENST00000553622 CNGA3Q16281 694 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 SKIDA1Q1XH10 827 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 TMEM31Q5JXX7 168 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 BEND6Q5SZJ8 279 aaPredicted RBP9.77□□□□□ -0.85
CHD8-204ENST00000553622 AGBL4Q5VU57 503 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 ESRP1Q6NXG1 681 aaKnown RBP9.77□□□□□ -0.85
CHD8-204ENST00000553622 RASSF3Q86WH2 238 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 TTC30BQ8N4P2 665 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 GSDMBQ8TAX9 411 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 STYXQ8WUJ0 223 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 RAB7BQ96AH8 199 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 MRRFQ96E11 262 aaKnown RBP9.77□□□□□ -0.85
CHD8-204ENST00000553622 ZNF778Q96MU6 729 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 FCRL3Q96P31 734 aaPredicted RBP9.77□□□□□ -0.85
CHD8-204ENST00000553622 MCCC1Q96RQ3 725 aaPredicted RBP9.77□□□□□ -0.85
CHD8-204ENST00000553622 KIFC1Q9BW19 673 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 TXLNGYQ9BZA5 131 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 TPSD1Q9BZJ3 242 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 MRM3Q9HC36 420 aaKnown RBP9.77□□□□□ -0.85
CHD8-204ENST00000553622 LRRC4CQ9HCJ2 640 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 CD248Q9HCU0 757 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 CD93Q9NPY3 652 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 C20orf96Q9NUD7 363 aaPredicted RBP9.77□□□□□ -0.85
CHD8-204ENST00000553622 PKD2L2Q9NZM6 624 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 CD84Q9UIB8 345 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 SCML1Q9UN30 329 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 CYP8B1Q9UNU6 501 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 COQ6Q9Y2Z9 468 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 ABCA7Q8IZY2 2146 aa9.77□□□□□ -0.85
CHD8-204ENST00000553622 TP53BP1Q12888 1972 aaPredicted RBP9.77□□□□□ -0.85
CHD8-204ENST00000553622 A0A087WUV0 522 aaPredicted RBP9.76□□□□□ -0.85
CHD8-204ENST00000553622 TBC1D3DA0A087WVF3 549 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 TBC1D3IA0A087WXS9 549 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 TBC1D3EA0A087X179 549 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 TBC1D3KA0A087X1G2 549 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 TBC1D3FA6NER0 549 aaPredicted RBP9.76□□□□□ -0.85
CHD8-204ENST00000553622 MROH6A6NGR9 719 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 OR51F1A6NGY5 319 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 SMIM23A6NLE4 172 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 TBC1D3LB9A6J9 549 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 GOLGA8KD6RF30 607 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 GOLGA8TH3BQL2 631 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 DYNC1I1O14576 645 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 RPP40O75818 363 aaKnown RBP9.76□□□□□ -0.85
CHD8-204ENST00000553622 VAPBO95292 243 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 C1SP09871 688 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 TBC1D3HP0C7X1 549 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 ERVK-10P10266 1014 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 ZNF30P17039 623 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 STX2P32856 288 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 TPMTP51580 245 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 CCR3P51677 355 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 STC1P52823 247 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 ADPRHP54922 357 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 GPX6P59796 221 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 IFFO1Q0D2I5 559 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 THOC5Q13769 683 aaKnown RBP9.76□□□□□ -0.85
CHD8-204ENST00000553622 EFTUD2Q15029 972 aaKnown RBP eCLIP9.76□□□□□ -0.85
CHD8-204ENST00000553622 UAP1Q16222 522 aaPredicted RBP9.76□□□□□ -0.85
CHD8-204ENST00000553622 LONRF1Q17RB8 773 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 STEAP4Q687X5 459 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 TBC1D3GQ6DHY5 549 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 TBC1D3CQ6IPX1 549 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 TRMT10BQ6PF06 316 aaKnown RBP9.76□□□□□ -0.85
CHD8-204ENST00000553622 FAM151BQ6UXP7 276 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 RFLNAQ6ZTI6 216 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 MICALCLQ6ZW33 695 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 USP30Q70CQ3 517 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 HSD11B1LQ7Z5J1 315 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 KBTBD6Q86V97 674 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 KCNMB4Q86W47 210 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 RELL1Q8IUW5 271 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 CTAGE3PQ8IX95 158 aa9.76□□□□□ -0.85
CHD8-204ENST00000553622 UNC5BQ8IZJ1 945 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms