RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 WDR83Q9BRX9 315 aaKnown RBP5.16□□□□□ -1.58
SCFD1-209ENST00000553280 B3GNT4Q9C0J1 378 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 AAMDCQ9H7C9 122 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 DDX4Q9NQI0 724 aaKnown RBP5.16□□□□□ -1.58
SCFD1-209ENST00000553280 ANAPC2Q9UJX6 822 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 R3HDM2Q9Y2K5 976 aaKnown RBP5.16□□□□□ -1.58
SCFD1-209ENST00000553280 ARHGEF40Q8TER5 1519 aa5.15□□□□□ -1.58
SCFD1-209ENST00000553280 A0A1W2PR77 199 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 GPC4O75487 556 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 IGLV2-14P01704 120 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 HIST1H2ABP04908 130 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 ABCB1P08183 1280 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-209ENST00000553280 CTSAP10619 480 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 TFPIP10646 304 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 HIST1H2ADP20671 130 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 DCTDP32321 178 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 PTH2RP49190 550 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 ZNF41P51814 821 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-209ENST00000553280 RPS13P62277 151 aaKnown RBP5.15□□□□□ -1.59
SCFD1-209ENST00000553280 TFCP2Q12800 502 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 SCARB2Q14108 478 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 C2orf68Q2NKX9 166 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 CRY2Q49AN0 593 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 RARS2Q5T160 578 aaKnown RBP5.15□□□□□ -1.59
SCFD1-209ENST00000553280 LRCH2Q5VUJ6 765 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 DAB2IPQ5VWQ8 1189 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 HIST2H2BCQ6DN03 193 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 HIST2H2BDQ6DRA6 164 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 KRT80Q6KB66 452 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 TRILQ7L0X0 811 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 HIST3H2AQ7L7L0 130 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 FAM217AQ8IXS0 508 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 GPATCH11Q8N954 259 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 GSDMBQ8TAX9 411 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 NSMCE1Q8WV22 266 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 ZNF622Q969S3 477 aaKnown RBP eCLIP5.15□□□□□ -1.59
SCFD1-209ENST00000553280 EME1Q96AY2 570 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 RRNAD1Q96FB5 475 aaKnown RBP5.15□□□□□ -1.59
SCFD1-209ENST00000553280 FAM118BQ9BPY3 351 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 DENND2DQ9H6A0 471 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-209ENST00000553280 THSD1Q9NS62 852 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 CWC15Q9P013 229 aaKnown RBP5.15□□□□□ -1.59
SCFD1-209ENST00000553280 PTGFRNQ9P2B2 879 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 WDR35Q9P2L0 1181 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 COPG2Q9UBF2 871 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 PLAGL1Q9UM63 463 aa5.15□□□□□ -1.59
SCFD1-209ENST00000553280 LOC102723996A0A087X1L8 192 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 TCRBV21S2A2A0A5A6 115 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 LRRC3CA6NJW4 275 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 AKR1B15C9JRZ8 316 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-209ENST00000553280 PSMD10O75832 226 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 CLDN7O95471 211 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 MYBL1P10243 752 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 SUOXP51687 545 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 MRPS34P82930 218 aaKnown RBP5.14□□□□□ -1.59
SCFD1-209ENST00000553280 GHRHRQ02643 423 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 SNTB1Q13884 538 aaKnown RBP5.14□□□□□ -1.59
SCFD1-209ENST00000553280 KCNC3Q14003 757 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 SMTNL2Q2TAL5 461 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 IGSF11Q5DX21 431 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 ZNF628Q5EBL2 1059 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 ASPHD1Q5U4P2 390 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 KIAA1614Q5VZ46 1190 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 PAPD7Q5XG87 772 aaKnown RBP5.14□□□□□ -1.59
SCFD1-209ENST00000553280 HEPHL1Q6MZM0 1159 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 TMEM71Q6P5X7 295 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 CCDC186Q7Z3E2 898 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 ADGRG3Q86Y34 549 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 GALNT16Q8N428 558 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 TEX45Q8NA69 505 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 FAM98AQ8NCA5 519 aaKnown RBP5.14□□□□□ -1.59
SCFD1-209ENST00000553280 Q8NFD4 153 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 CEP76Q8TAP6 659 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 PTPMT1Q8WUK0 201 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-209ENST00000553280 ATP6V1E2Q96A05 226 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 VPS33AQ96AX1 596 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 TMEM18Q96B42 140 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 MOAP1Q96BY2 351 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 RMDN1Q96DB5 314 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 ZNF570Q96NI8 536 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 DGAT2Q96PD7 388 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 LHPPQ9H008 270 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 ZWILCHQ9H900 591 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 PAG1Q9NWQ8 432 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 MTMR10Q9NXD2 777 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 KLHL13Q9P2N7 655 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 ERVK-11Q9UQG0 969 aa5.14□□□□□ -1.59
SCFD1-209ENST00000553280 PCSK5Q92824 1860 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 POLR2AP24928 1970 aaKnown RBP5.13□□□□□ -1.59
SCFD1-209ENST00000553280 C1orf226A1L170 272 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 TMEM202A6NGA9 273 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 LINC01548A6NM66 108 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 STMND1H3BQB6 276 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 OGG1O15527 345 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 RGS11O94810 467 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 GGPS1O95749 300 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 LATS1O95835 1130 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 MMP9P14780 707 aa5.13□□□□□ -1.59
SCFD1-209ENST00000553280 ANXA7P20073 488 aaKnown RBP5.13□□□□□ -1.59
SCFD1-209ENST00000553280 CHATP28329 748 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms