RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 CD68P34810 354 aaPredicted RBP18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 ETV3P41162 512 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 HNRNPKP61978 463 aaKnown RBP eCLIP18.49■□□□□ 0.551e-6■■■■□ 23
PRPF40B-216ENST00000552301 KLF1Q13351 362 aaPredicted RBP18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 FZD2Q14332 565 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 INPP5AQ14642 412 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 GSE1Q14687 1217 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 QPCTQ16769 361 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 HS1BP3Q53T59 392 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 CRTC1Q6UUV9 634 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 MACC1Q6ZN28 852 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 HSD11B1LQ7Z5J1 315 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 CCHCR1Q8TD31 782 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 SAP25Q8TEE9 199 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 DTD2Q96FN9 168 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 PDLIM2Q96JY6 352 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 CAMK1GQ96NX5 476 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 FCRL5Q96RD9 977 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 CDC6Q99741 560 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 UBP1Q9NZI7 540 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 PCOLCE2Q9UKZ9 415 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 NDST3O95803 873 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 WNT3AP56704 352 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 SIM1P81133 766 aaPredicted RBP18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 BNIP3Q12983 259 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 PRPSAP1Q14558 356 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 NFATC4Q14934 902 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 PTPRRQ15256 657 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 SHBQ15464 509 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 TRIP6Q15654 476 aaKnown RBP18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 ZNF542PQ5EBM4 170 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 ESRP1Q6NXG1 681 aaKnown RBP18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 Q6ZVL8 140 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 SLC13A5Q86YT5 568 aaPredicted RBP18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 IPMKQ8NFU5 416 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 SPATA13Q96N96 652 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 SMIM14Q96QK8 99 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 LYSMD1Q96S90 227 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 APOOQ9BUR5 198 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 FSD1LQ9BXM9 530 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 GBA3Q9H227 469 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 KCNF1Q9H3M0 494 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 WDR26Q9H7D7 661 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 BTBD3Q9Y2F9 522 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 OR1A2Q9Y585 309 aa18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 TDRD6O60522 2096 aaKnown RBP18.48■□□□□ 0.55
PRPF40B-216ENST00000552301 SPAARA0A1B0GVQ0 90 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 ANXA9O76027 345 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 NME1P15531 152 aaKnown RBP18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 TSHRP16473 764 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 JUNDP17535 347 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 GM2AP17900 193 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 KELP23276 732 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 MSNP26038 577 aaKnown RBP18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 STC1P52823 247 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 GEMP55040 296 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 MPP3Q13368 585 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 RAET1GQ6H3X3 334 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 DBX2Q6ZNG2 339 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 BTN2A2Q8WVV5 523 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 TADA1Q96BN2 335 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 LRRC45Q96CN5 670 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 WDR92Q96MX6 357 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 PPP1R2P1Q96PQ5 205 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 TRIB3Q96RU7 358 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 SRPK1Q96SB4 655 aaKnown RBP18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 FRMD8P1Q9BZ68 369 aaPredicted RBP18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 SLC13A1Q9BZW2 595 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 PHPT1Q9NRX4 125 aaPredicted RBP18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 PKD2L2Q9NZM6 624 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 FTSJ1Q9UET6 329 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 LAMA1P25391 3075 aa18.47■□□□□ 0.55
PRPF40B-216ENST00000552301 TCRBV7S2A1N4TA0A589 114 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 PDE2AO00408 941 aaPredicted RBP18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 PIAS2O75928 621 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 CLDN7O95471 211 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 SLC4A1P02730 911 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 CSF2P04141 144 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 C1SP09871 688 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 BLKP51451 505 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 KIAA1024LP59773 190 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 PPARDQ03181 441 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 ANKRD20A2Q5SQ80 823 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 TPRG1LQ5T0D9 272 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 FAXCQ5TGI0 409 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 ANKRD20A1Q5TYW2 823 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 ANKRD20A3Q5VUR7 823 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 PNCKQ6P2M8 343 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 ENPP7Q6UWV6 458 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 ARHGEF18Q6ZSZ5 1173 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 PHACTR4Q8IZ21 702 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 EID2Q8N6I1 236 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 PLA2G15Q8NCC3 412 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 CCDC110Q8TBZ0 833 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 AP2M1Q96CW1 435 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 OXNAD1Q96HP4 312 aaPredicted RBP18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 GPR63Q9BZJ6 419 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 KLQ9UEF7 1012 aa18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 APOBEC3BQ9UH17 382 aaKnown RBP18.46■□□□□ 0.55
PRPF40B-216ENST00000552301 CD84Q9UIB8 345 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms