RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 AIF1P55008 147 aa16.34■□□□□ 0.21
RAB5C-209ENST00000552162 TPI1P60174 286 aa16.34■□□□□ 0.21
RAB5C-209ENST00000552162 FOXK1P85037 733 aa16.34■□□□□ 0.21
RAB5C-209ENST00000552162 BCL2L1Q07817 233 aa16.34■□□□□ 0.21
RAB5C-209ENST00000552162 TRA2AQ13595 282 aaKnown RBP eCLIP16.34■□□□□ 0.21
RAB5C-209ENST00000552162 CACNA2D3Q8IZS8 1091 aa16.34■□□□□ 0.21
RAB5C-209ENST00000552162 AGBL5Q8NDL9 886 aa16.34■□□□□ 0.21
RAB5C-209ENST00000552162 OR4D9Q8NGE8 314 aa16.34■□□□□ 0.21
RAB5C-209ENST00000552162 PATE1Q8WXA2 126 aa16.34■□□□□ 0.21
RAB5C-209ENST00000552162 NUS1Q96E22 293 aa16.34■□□□□ 0.21
RAB5C-209ENST00000552162 DDA1Q9BW61 102 aa16.34■□□□□ 0.21
RAB5C-209ENST00000552162 ZNF891A8MT65 544 aaPredicted RBP16.33■□□□□ 0.2
RAB5C-209ENST00000552162 CALB1P05937 261 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 THRAP10827 490 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 AK4P27144 223 aaPredicted RBP16.33■□□□□ 0.2
RAB5C-209ENST00000552162 CSF2RBP32927 897 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 CSTF2P33240 577 aaKnown RBP eCLIP16.33■□□□□ 0.2
RAB5C-209ENST00000552162 SOX5P35711 763 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 GPR3P46089 330 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 GNPDA1P46926 289 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 ZNF143P52747 638 aaPredicted RBP16.33■□□□□ 0.2
RAB5C-209ENST00000552162 POLR2LP62875 67 aaKnown RBP16.33■□□□□ 0.2
RAB5C-209ENST00000552162 BECN1Q14457 450 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 IGFBP7Q16270 282 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 NKAIN2Q5VXU1 208 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 SLC30A9Q6PML9 568 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 HEATR4Q86WZ0 1026 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 PCDHB18PQ96TA0 734 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 CINPQ9BW66 212 aaPredicted RBP16.33■□□□□ 0.2
RAB5C-209ENST00000552162 SLC39A8Q9C0K1 460 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 PHPT1Q9NRX4 125 aaPredicted RBP16.33■□□□□ 0.2
RAB5C-209ENST00000552162 TRNAU1APQ9NX07 287 aaKnown RBP16.33■□□□□ 0.2
RAB5C-209ENST00000552162 DONSONQ9NYP3 566 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 ANAPC2Q9UJX6 822 aa16.33■□□□□ 0.2
RAB5C-209ENST00000552162 USP9YO00507 2555 aaPredicted RBP16.33■□□□□ 0.2
RAB5C-209ENST00000552162 ANKRD62A6NC57 917 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 ARHGAP42A6NI28 874 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 SIGLEC16A6NMB1 481 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 TRAFD1O14545 582 aaPredicted RBP16.32■□□□□ 0.2
RAB5C-209ENST00000552162 RAD1O60671 282 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 FUCA1P04066 466 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 CEACAM5P06731 702 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 GP1BBP13224 206 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 MPSTP25325 297 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 HTR7P34969 479 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 KLK7P49862 253 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 PAPOLAP51003 745 aaKnown RBP16.32■□□□□ 0.2
RAB5C-209ENST00000552162 JAM2P57087 298 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 POLR2FP61218 127 aaKnown RBP16.32■□□□□ 0.2
RAB5C-209ENST00000552162 DPCR1Q3MIW9 517 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 DNAJC24Q6P3W2 148 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 PHF13Q86YI8 300 aaPredicted RBP16.32■□□□□ 0.2
RAB5C-209ENST00000552162 NAGSQ8N159 534 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 C9orf43Q8TAL5 461 aaPredicted RBP16.32■□□□□ 0.2
RAB5C-209ENST00000552162 PTCD2Q8WV60 388 aaKnown RBP16.32■□□□□ 0.2
RAB5C-209ENST00000552162 COQ10AQ96MF6 247 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 CATSPER2Q96P56 530 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 MCEEQ96PE7 176 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 TEX101Q9BY14 249 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 FRMD8Q9BZ67 464 aaPredicted RBP16.32■□□□□ 0.2
RAB5C-209ENST00000552162 ASPSCR1Q9BZE9 553 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 ZMYND15Q9H091 742 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 SLC39A1Q9NY26 324 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 TMEM9Q9P0T7 183 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 B4GALT6Q9UBX8 382 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 SUFUQ9UMX1 484 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 ST14Q9Y5Y6 855 aa16.32■□□□□ 0.2
RAB5C-209ENST00000552162 UTP20O75691 2785 aaKnown RBP16.31■□□□□ 0.2
RAB5C-209ENST00000552162 IGHV1OR21-1A0A087WYE8 117 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 CLEC18AA5D8T8 446 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 PPM1DO15297 605 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 CR2P20023 1033 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 ERCC5P28715 1186 aaPredicted RBP16.31■□□□□ 0.2
RAB5C-209ENST00000552162 RPL7AP62424 266 aaKnown RBP16.31■□□□□ 0.2
RAB5C-209ENST00000552162 CNGA3Q16281 694 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 CLEC16AQ2KHT3 1053 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 TCP11X2Q5H9J9 407 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 CLEC18BQ6UXF7 455 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 MON1BQ7L1V2 547 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 FAM129CQ86XR2 697 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 CLEC18CQ8NCF0 446 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 CNPY3Q9BT09 278 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 SP110Q9HB58 689 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 NLRC4Q9NPP4 1024 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 FAM207AQ9NSI2 230 aaPredicted RBP16.31■□□□□ 0.2
RAB5C-209ENST00000552162 SAMSN1Q9NSI8 373 aaKnown RBP16.31■□□□□ 0.2
RAB5C-209ENST00000552162 GPATCH2LQ9NWQ4 482 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 OCIAD1Q9NX40 245 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 KCNK4Q9NYG8 393 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 TAB2Q9NYJ8 693 aa16.31■□□□□ 0.2
RAB5C-209ENST00000552162 TCRBV5S1A1TA0A578 114 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 EFCAB7A8K855 629 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 B4E171 279 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 EPHB6O15197 1021 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 CAPN5O15484 640 aaPredicted RBP16.3■□□□□ 0.2
RAB5C-209ENST00000552162 PRKAR1AP10644 381 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 EEF1GP26641 437 aaKnown RBP16.3■□□□□ 0.2
RAB5C-209ENST00000552162 TSPAN7P41732 249 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 SCNN1BP51168 640 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 RAB15P59190 212 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms