RNA–Protein interactions for RNA: ENST00000551931.5

LETMD1-231, Transcript of LETM1 domain containing 1, human

TSL 3

Gene LETMD1, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-231	ENST00000551931	GPBAR1	Q8TDU6	330 aa		12.6	□□□□□ -0.39
LETMD1-231	ENST00000551931	JPH3	Q8WXH2	748 aa	Predicted RBP	12.6	□□□□□ -0.39
LETMD1-231	ENST00000551931	COQ10A	Q96MF6	247 aa		12.6	□□□□□ -0.39
LETMD1-231	ENST00000551931	PCMTD1	Q96MG8	357 aa	Predicted RBP	12.6	□□□□□ -0.39
LETMD1-231	ENST00000551931	KCTD15	Q96SI1	283 aa	Predicted RBP	12.6	□□□□□ -0.39
LETMD1-231	ENST00000551931	NUDT22	Q9BRQ3	303 aa		12.6	□□□□□ -0.39
LETMD1-231	ENST00000551931	SNRNP25	Q9BV90	132 aa	Known RBP	12.6	□□□□□ -0.39
LETMD1-231	ENST00000551931	CARS2	Q9HA77	564 aa	Known RBP	12.6	□□□□□ -0.39
LETMD1-231	ENST00000551931	SP110	Q9HB58	689 aa		12.6	□□□□□ -0.39
LETMD1-231	ENST00000551931	FANCL	Q9NW38	375 aa		12.6	□□□□□ -0.39
LETMD1-231	ENST00000551931	TAS2R14	Q9NYV8	317 aa		12.6	□□□□□ -0.39
LETMD1-231	ENST00000551931	B4GALT6	Q9UBX8	382 aa		12.6	□□□□□ -0.39
LETMD1-231	ENST00000551931	IL17B	Q9UHF5	180 aa		12.6	□□□□□ -0.39
LETMD1-231	ENST00000551931	ST14	Q9Y5Y6	855 aa		12.6	□□□□□ -0.39
LETMD1-231	ENST00000551931	LGALS16	A8MUM7	142 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	DFFA	O00273	331 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	ATMIN	O43313	823 aa	Predicted RBP	12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	FGF1	P05230	155 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	TPM2	P07951	284 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	CCNB1	P14635	433 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	ERCC2	P18074	760 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	AK4	P27144	223 aa	Predicted RBP	12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	SCNN1B	P51168	640 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	POLR2L	P62875	67 aa	Known RBP	12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	NSUN2	Q08J23	767 aa	Known RBP eCLIP	12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	CLCA4	Q14CN2	919 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	CNGA3	Q16281	694 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	ACAD10	Q6JQN1	1059 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	RFX8	Q6ZV50	586 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	PIM3	Q86V86	326 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	HEATR4	Q86WZ0	1026 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	KIAA1524	Q8TCG1	905 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	ZDHHC1	Q8WTX9	485 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	PATE1	Q8WXA2	126 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	NUS1	Q96E22	293 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	FUCA2	Q9BTY2	467 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	DONSON	Q9NYP3	566 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	TAAR2	Q9P1P5	351 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	PCSK1N	Q9UHG2	260 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	PCDHB11	Q9Y5F2	797 aa		12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	SPEN	Q96T58	3664 aa	Known RBP	12.59	□□□□□ -0.39
LETMD1-231	ENST00000551931	IGHV5-10-1	A0A0J9YXX1	117 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	SUV39H1	O43463	412 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	ECEL1	O95672	775 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	CEACAM5	P06731	702 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	PSMA2	P25787	234 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	CD82	P27701	267 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	ALDH4A1	P30038	563 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	AP1S1	P61966	158 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	IL10RB	Q08334	325 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	SLC10A7	Q0GE19	358 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	MAMLD1	Q13495	774 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	RFTN1	Q14699	578 aa	Predicted RBP	12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	NR1D2	Q14995	579 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	PTPRR	Q15256	657 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	TSR1	Q2NL82	804 aa	Known RBP	12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	PPP6R3	Q5H9R7	873 aa	Predicted RBP	12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	ERMARD	Q5T6L9	678 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	ATG14	Q6ZNE5	492 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	ZSCAN1	Q8NBB4	408 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	CCDC74B	Q96LY2	380 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	PSKH2	Q96QS6	385 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	SEMA3C	Q99985	751 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	SYT11	Q9BT88	431 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	TEX101	Q9BY14	249 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	GSDMC	Q9BYG8	508 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	FRMD8	Q9BZ67	464 aa	Predicted RBP	12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	TRIM7	Q9C029	511 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	PHPT1	Q9NRX4	125 aa	Predicted RBP	12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	LIMA1	Q9UHB6	759 aa	Known RBP	12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	SUFU	Q9UMX1	484 aa		12.58	□□□□□ -0.4
LETMD1-231	ENST00000551931	RHPN2P1	A8MT19	583 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	TMCO5B	A8MYB1	307 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	EIF3CL	B5ME19	914 aa	Known RBP	12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	STMND1	H3BQB6	276 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	PDE2A	O00408	941 aa	Predicted RBP	12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	DAPK3	O43293	454 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	HTRA2	O43464	458 aa	Predicted RBP	12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	HEXIM1	O94992	359 aa	Known RBP	12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	FGF3	P11487	239 aa	Predicted RBP	12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	CR2	P20023	1033 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	LHCGR	P22888	699 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	CD1C	P29017	333 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	VIPR1	P32241	457 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	CSF2RB	P32927	897 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	ETV3	P41162	512 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	GNPDA1	P46926	289 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	POLD2	P49005	469 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	CDK3	Q00526	305 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	UBXN1	Q04323	297 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	ILF3	Q12906	894 aa	Known RBP eCLIP	12.57	□□□□□ -0.4	1e-6	■□□□□ 8.9
LETMD1-231	ENST00000551931	LBR	Q14739	615 aa	Known RBP	12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	TMCO4	Q5TGY1	634 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	TMEM164	Q5U3C3	297 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	NKAIN2	Q5VXU1	208 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	DENND2C	Q68D51	928 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	PLEKHA7	Q6IQ23	1121 aa		12.57	□□□□□ -0.4
LETMD1-231	ENST00000551931	SLC30A9	Q6PML9	568 aa		12.57	□□□□□ -0.4

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