RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 C19orf60Q96EN9 201 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 ZFRQ96KR1 1074 aaKnown RBP13.06□□□□□ -0.32
CACNB3-219ENST00000551544 C1orf74Q96LT6 269 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 MFSD1Q9H3U5 465 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 PREBQ9HCU5 417 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 GALNT8Q9NY28 637 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 TLR6Q9Y2C9 796 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 C7orf72A4D263 438 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 MROH6A6NGR9 719 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 WASH4PA8MWX3 477 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 C9JVG2 144 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 TNPO2O14787 897 aaKnown RBP13.05□□□□□ -0.32
CACNB3-219ENST00000551544 C8BP07358 591 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 NDST2P52849 883 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 USP46P62068 366 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 MAP7D1Q3KQU3 841 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 RAP1GAP2Q684P5 730 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 LARP4Q71RC2 724 aaKnown RBP eCLIP13.05□□□□□ -0.32
CACNB3-219ENST00000551544 MON1AQ86VX9 555 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 PGBD5Q8N414 524 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 IGSF8Q969P0 613 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 MRPS26Q9BYN8 205 aaKnown RBP13.05□□□□□ -0.32
CACNB3-219ENST00000551544 GMIPQ9P107 970 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 HSFX1Q9UBD0 423 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 ARL5AQ9Y689 179 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 COL4A4P53420 1690 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-219ENST00000551544 A0A1B0GTW7 788 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 PAPSS2O95340 614 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-219ENST00000551544 ALDOCP09972 364 aaKnown RBP13.05□□□□□ -0.32
CACNB3-219ENST00000551544 SLC2A3P11169 496 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 PSMC3P17980 439 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 NELFEP18615 380 aaKnown RBP13.05□□□□□ -0.32
CACNB3-219ENST00000551544 PSMD8P48556 350 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 SH3BP2P78314 561 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 MTX3Q5HYI7 312 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 PTGR2Q8N8N7 351 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-219ENST00000551544 SLCO4A1Q96BD0 722 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 DNAJC1Q96KC8 554 aaKnown RBP13.05□□□□□ -0.32
CACNB3-219ENST00000551544 RBM38Q9H0Z9 239 aaKnown RBP13.05□□□□□ -0.32
CACNB3-219ENST00000551544 NOL11Q9H8H0 719 aaKnown RBP13.05□□□□□ -0.32
CACNB3-219ENST00000551544 AKTIPQ9H8T0 292 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 PRDM5Q9NQX1 630 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-219ENST00000551544 MRGBPQ9NV56 204 aa13.05□□□□□ -0.32
CACNB3-219ENST00000551544 ZNF839A8K0R7 811 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 NR5A2O00482 541 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 LDB2O43679 373 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 B4GALT3O60512 393 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 GOT2P00505 430 aaKnown RBP13.04□□□□□ -0.32
CACNB3-219ENST00000551544 HERVK_113P63132 956 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 FKBP1BP68106 108 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 NRG1Q02297 640 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-219ENST00000551544 GALNT1Q10472 559 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-219ENST00000551544 FUNDC1Q8IVP5 155 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 NUP93Q8N1F7 819 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 SLC39A13Q96H72 371 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 LRCH3Q96II8 777 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 CIB1Q99828 191 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 SEMA3CQ99985 751 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 TRMOQ9BU70 441 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 ERVK-6Q9BXR3 956 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 ZNF696Q9H7X3 374 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 MID1IP1Q9NPA3 183 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 CD300AQ9UGN4 299 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 SARDHQ9UL12 918 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 MIA3Q5JRA6 1907 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 UBXN8O00124 270 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 KPNA6O60684 536 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 GLP2RO95838 553 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 CAPNS1P04632 268 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 ATXN1LP0C7T5 689 aaKnown RBP13.04□□□□□ -0.32
CACNB3-219ENST00000551544 TYMPP19971 482 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 GALNT3Q14435 633 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 LPIN1Q14693 890 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 PFKFB4Q16877 469 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 MYLK3Q32MK0 819 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 FBXO48Q5FWF7 155 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 SAMD4BQ5PRF9 694 aaKnown RBP13.04□□□□□ -0.32
CACNB3-219ENST00000551544 C6orf10Q5SRN2 563 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 FAM45BPQ6NSW5 357 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 FBXL22Q6P050 247 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 ZNF549Q6P9A3 640 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 KLHDC10Q6PID8 442 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 ZNF280BQ86YH2 543 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 DDIASQ8IXT1 998 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 ZNF683Q8IZ20 524 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 MYO1HQ8N1T3 1032 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 ARRDC2Q8TBH0 407 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 FAM45AQ8TCE6 357 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 SLC29A1Q99808 456 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 TMEM248Q9NWD8 314 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 DNAJC15Q9Y5T4 150 aa13.04□□□□□ -0.32
CACNB3-219ENST00000551544 TIPRLO75663 272 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 STAMBPO95630 424 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 IMPDH2P12268 514 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 CD1DP15813 335 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 GRIA3P42263 894 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 FOXA1P55317 472 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 CREB5Q02930 508 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 TRAP1Q12931 704 aaKnown RBP13.03□□□□□ -0.32
CACNB3-219ENST00000551544 IKBKEQ14164 716 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms