RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 RGS20O76081 388 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 CBX6O95503 412 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 MT-CO1P00395 513 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 ITGAVP06756 1048 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 ABCG1P45844 678 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 CLCN5P51795 746 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 PLK1P53350 603 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 STX5Q13190 355 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 NAB1Q13506 487 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 NAIF1Q69YI7 327 aaPredicted RBP12.21□□□□□ -0.45
NR4A1-215ENST00000550557 TTC27Q6P3X3 843 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 ZNF75CPQ92670 426 aaPredicted RBP12.21□□□□□ -0.45
NR4A1-215ENST00000550557 BTBD10Q9BSF8 475 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 DPY30Q9C005 99 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 SMG9Q9H0W8 520 aaKnown RBP12.21□□□□□ -0.45
NR4A1-215ENST00000550557 LIMD1Q9UGP4 676 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 INSIG1O15503 277 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 HNRNPRO43390 633 aaKnown RBP12.21□□□□□ -0.45
NR4A1-215ENST00000550557 CFHP08603 1231 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 CDH2P19022 906 aaPredicted RBP12.21□□□□□ -0.45
NR4A1-215ENST00000550557 BGNP21810 368 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 GRK2P25098 689 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 WDR5P61964 334 aaKnown RBP12.21□□□□□ -0.45
NR4A1-215ENST00000550557 MAD2L1Q13257 205 aaPredicted RBP12.21□□□□□ -0.45
NR4A1-215ENST00000550557 AASDHQ4L235 1098 aaPredicted RBP12.21□□□□□ -0.45
NR4A1-215ENST00000550557 UNC5AQ6ZN44 842 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 OTUB2Q96DC9 234 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 KCTD15Q96SI1 283 aaPredicted RBP12.21□□□□□ -0.45
NR4A1-215ENST00000550557 HGH1Q9BTY7 390 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 SDK1Q7Z5N4 2213 aa12.21□□□□□ -0.45
NR4A1-215ENST00000550557 LEFTY2O00292 366 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 CCNDBP1O95273 360 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 GJB5O95377 273 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 APOA1P02647 267 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 RPL22P35268 128 aaKnown RBP12.21□□□□□ -0.46
NR4A1-215ENST00000550557 MAGEA11P43364 429 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 NME5P56597 212 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 FOXM1Q08050 763 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 RASA2Q15283 850 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 TAF5Q15542 800 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 CHMP1BQ7LBR1 199 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 CHST15Q7LFX5 561 aaPredicted RBP12.21□□□□□ -0.46
NR4A1-215ENST00000550557 SCUBE1Q8IWY4 988 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 DSELQ8IZU8 1212 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 ZNF366Q8N895 744 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 TCP10LQ8TDR4 215 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 CYB5D2Q8WUJ1 264 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 PPP1R10Q96QC0 940 aaKnown RBP12.21□□□□□ -0.46
NR4A1-215ENST00000550557 CYP2S1Q96SQ9 504 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 SLCO1B7G3V0H7 640 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 PRMT5O14744 637 aaPredicted RBP12.21□□□□□ -0.46
NR4A1-215ENST00000550557 AVILO75366 819 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 ABCB1P08183 1280 aaPredicted RBP12.21□□□□□ -0.46
NR4A1-215ENST00000550557 PTGIRP43119 386 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 NEK3P51956 506 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 IL10RBQ08334 325 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 ZC3H12BQ5HYM0 836 aaKnown RBP12.21□□□□□ -0.46
NR4A1-215ENST00000550557 KCTD13Q8WZ19 329 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 SMARCD2Q92925 531 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 LMAN2LQ9H0V9 348 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 SAR1AQ9NR31 198 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 CD84Q9UIB8 345 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 FBXW11Q9UKB1 542 aa12.21□□□□□ -0.46
NR4A1-215ENST00000550557 CDV3Q9UKY7 258 aaKnown RBP12.21□□□□□ -0.46
NR4A1-215ENST00000550557 CD3EAPO15446 510 aaKnown RBP12.2□□□□□ -0.46
NR4A1-215ENST00000550557 CCNCP24863 283 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 DSC2Q02487 901 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 ATXN7L2Q5T6C5 722 aaPredicted RBP12.2□□□□□ -0.46
NR4A1-215ENST00000550557 ADAMTSL2Q86TH1 951 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 SELENOMQ8WWX9 145 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 PSMG2Q969U7 264 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 FAIM2Q9BWQ8 316 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 CDH19Q9H159 772 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 RNPEPL1Q9HAU8 725 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.2□□□□□ -0.46
NR4A1-215ENST00000550557 NDUFA13Q9P0J0 144 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 ANKRD6Q9Y2G4 727 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 SNX10Q9Y5X0 201 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 PTPRZ1P23471 2315 aaPredicted RBP12.2□□□□□ -0.46
NR4A1-215ENST00000550557 EDDM13A0A1B0GTR0 161 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 RFPL2O75678 378 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 NTSP30990 170 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 CCR4P51679 360 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 KCNQ1P51787 676 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 TRIP10Q15642 601 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 ZNHIT3Q15649 155 aaPredicted RBP12.2□□□□□ -0.46
NR4A1-215ENST00000550557 N4BP2L1Q5TBK1 243 aaPredicted RBP12.2□□□□□ -0.46
NR4A1-215ENST00000550557 CERS2Q96G23 380 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 FBXO5Q9UKT4 447 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 C9IYK1 514 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 SGTAO43765 313 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 MFSD11O43934 449 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 LRCH4O75427 683 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 UNGP13051 313 aaPredicted RBP12.2□□□□□ -0.46
NR4A1-215ENST00000550557 ETS1P14921 441 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 ALAS2P22557 587 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 ACTR1BP42025 376 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 PCYT1AP49585 367 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 NEK2P51955 445 aa12.2□□□□□ -0.46
NR4A1-215ENST00000550557 ACTR1AP61163 376 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms