RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 NUDT22Q9BRQ3 303 aa15.43■□□□□ 0.06
RAB5C-205ENST00000550013 STARD5Q9NSY2 213 aa15.43■□□□□ 0.06
RAB5C-205ENST00000550013 LIMA1Q9UHB6 759 aaKnown RBP15.43■□□□□ 0.06
RAB5C-205ENST00000550013 COL12A1Q99715 3063 aa15.43■□□□□ 0.06
RAB5C-205ENST00000550013 A0A1W2PQC6 194 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 TMCO5BA8MYB1 307 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 ARHGAP6O43182 974 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 CPNE6O95741 557 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 FGF1P05230 155 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 CEACAM5P06731 702 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 MYCLP1P12525 358 aaPredicted RBP15.42■□□□□ 0.06
RAB5C-205ENST00000550013 CCL4P13236 92 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 DESP17661 470 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 ITGB6P18564 788 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 AK4P27144 223 aaPredicted RBP15.42■□□□□ 0.06
RAB5C-205ENST00000550013 ALDH4A1P30038 563 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 POLR2LP62875 67 aaKnown RBP15.42■□□□□ 0.06
RAB5C-205ENST00000550013 IL10RBQ08334 325 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 NSUN2Q08J23 767 aaKnown RBP eCLIP15.42■□□□□ 0.06
RAB5C-205ENST00000550013 SLC10A7Q0GE19 358 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 RFTN1Q14699 578 aaPredicted RBP15.42■□□□□ 0.06
RAB5C-205ENST00000550013 CNGA3Q16281 694 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 TSR1Q2NL82 804 aaKnown RBP15.42■□□□□ 0.06
RAB5C-205ENST00000550013 PPP6R3Q5H9R7 873 aaPredicted RBP15.42■□□□□ 0.06
RAB5C-205ENST00000550013 DENND2CQ68D51 928 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 XKR5Q6UX68 686 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 ZNF574Q6ZN55 896 aaPredicted RBP15.42■□□□□ 0.06
RAB5C-205ENST00000550013 CYP4V2Q6ZWL3 525 aaPredicted RBP15.42■□□□□ 0.06
RAB5C-205ENST00000550013 ZNF438Q7Z4V0 828 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 PIM3Q86V86 326 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 HEATR4Q86WZ0 1026 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 C17orf82Q86X59 251 aaPredicted RBP15.42■□□□□ 0.06
RAB5C-205ENST00000550013 RCBTB1Q8NDN9 531 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 KIAA1524Q8TCG1 905 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 ZDHHC1Q8WTX9 485 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 PATE1Q8WXA2 126 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 PMEPA1Q969W9 287 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 NUS1Q96E22 293 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 TRIM7Q9C029 511 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 PCDHB11Q9Y5F2 797 aa15.42■□□□□ 0.06
RAB5C-205ENST00000550013 RHPN2P1A8MT19 583 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 EIF3CLB5ME19 914 aaKnown RBP15.41■□□□□ 0.06
RAB5C-205ENST00000550013 PDE2AO00408 941 aaPredicted RBP15.41■□□□□ 0.06
RAB5C-205ENST00000550013 ECEL1O95672 775 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 CSRP3P50461 194 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 AP1S1P61966 158 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 LBRQ14739 615 aaKnown RBP15.41■□□□□ 0.06
RAB5C-205ENST00000550013 PTPRRQ15256 657 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 PLEKHA7Q6IQ23 1121 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 ZSCAN1Q8NBB4 408 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 PSKH2Q96QS6 385 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 ERGIC2Q96RQ1 377 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 EIF3CQ99613 913 aaKnown RBP15.41■□□□□ 0.06
RAB5C-205ENST00000550013 SYT11Q9BT88 431 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 FRMD8Q9BZ67 464 aaPredicted RBP15.41■□□□□ 0.06
RAB5C-205ENST00000550013 PHPT1Q9NRX4 125 aaPredicted RBP15.41■□□□□ 0.06
RAB5C-205ENST00000550013 PARVAQ9NVD7 372 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 TAAR2Q9P1P5 351 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 SEPT3Q9UH03 358 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 IL17BQ9UHF5 180 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 PCDHGC4Q9Y5F7 938 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 ST14Q9Y5Y6 855 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 ZFC3H1O60293 1989 aaKnown RBP15.41■□□□□ 0.06
RAB5C-205ENST00000550013 FLNCQ14315 2725 aa15.41■□□□□ 0.06
RAB5C-205ENST00000550013 IGHV5-10-1A0A0J9YXX1 117 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 TERTO14746 1132 aaKnown RBP15.4■□□□□ 0.06
RAB5C-205ENST00000550013 HTRA2O43464 458 aaPredicted RBP15.4■□□□□ 0.06
RAB5C-205ENST00000550013 HEXIM1O94992 359 aaKnown RBP15.4■□□□□ 0.06
RAB5C-205ENST00000550013 CPP00450 1065 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 FERP16591 822 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 TNFAIP3P21580 790 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 CD1CP29017 333 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 MIPP30301 263 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 VIPR1P32241 457 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 ETV3P41162 512 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 GNPDA1P46926 289 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 POLD2P49005 469 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 RENBPP51606 427 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 ARSDP51689 593 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 ILF3Q12906 894 aaKnown RBP eCLIP15.4■□□□□ 0.062e-6■□□□□ 11.1
RAB5C-205ENST00000550013 DPYSQ14117 519 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 NR1D2Q14995 579 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 CLCA4Q14CN2 919 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 TMCO4Q5TGY1 634 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 SLC30A9Q6PML9 568 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 APTXQ7Z2E3 356 aaKnown RBP15.4■□□□□ 0.06
RAB5C-205ENST00000550013 HSD11B1LQ7Z5J1 315 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 IRF2BP2Q7Z5L9 587 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 PGBD5Q8N414 524 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 ANKRD20A12PQ8NF67 263 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 PDCD6IPQ8WUM4 868 aaKnown RBP15.4■□□□□ 0.06
RAB5C-205ENST00000550013 DTD2Q96FN9 168 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 CCDC74BQ96LY2 380 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 FUCA2Q9BTY2 467 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 TEX101Q9BY14 249 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 GSDMCQ9BYG8 508 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 CWC15Q9P013 229 aaKnown RBP15.4■□□□□ 0.06
RAB5C-205ENST00000550013 SUFUQ9UMX1 484 aa15.4■□□□□ 0.06
RAB5C-205ENST00000550013 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.39■□□□□ 0.05
RAB5C-205ENST00000550013 GOLGA6CA6NDK9 693 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms