RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 SGSM3Q96HU1 749 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 ZNF778Q96MU6 729 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 FAM167BQ9BTA0 163 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 CDH19Q9H159 772 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 MFSD1Q9H3U5 465 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 TBC1D17Q9HA65 648 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 CD248Q9HCU0 757 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 IL17CQ9P0M4 197 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 VPS18Q9P253 973 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 MUTYHQ9UIF7 546 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 NFS1Q9Y697 457 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 UNC80Q8N2C7 3258 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 GOLGA6L10A6NI86 522 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 H7C0S8 307 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 AURKAO14965 403 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 AREL1O15033 823 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 MMP12P39900 470 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 MAGEA9P43362 315 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 ARCN1P48444 511 aaKnown RBP17.4■□□□□ 0.38
LETMD1-220ENST00000549686 ZXDAP98168 799 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 GPS2Q13227 327 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 THOC5Q13769 683 aaKnown RBP17.4■□□□□ 0.38
LETMD1-220ENST00000549686 KBTBD12Q3ZCT8 623 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 TJAP1Q5JTD0 557 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 UBAP2Q5T6F2 1119 aaKnown RBP17.4■□□□□ 0.38
LETMD1-220ENST00000549686 LRRC66Q68CR7 880 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 TRMT10BQ6PF06 316 aaKnown RBP17.4■□□□□ 0.38
LETMD1-220ENST00000549686 AFTPHQ6ULP2 937 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 CES3Q6UWW8 571 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 KBTBD6Q86V97 674 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 TDRPQ86YL5 185 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 OR4K2Q8NGD2 314 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 UHMK1Q8TAS1 419 aaKnown RBP17.4■□□□□ 0.38
LETMD1-220ENST00000549686 FAM131CQ96AQ9 280 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 DNAJC1Q96KC8 554 aaKnown RBP17.4■□□□□ 0.38
LETMD1-220ENST00000549686 TRIM56Q9BRZ2 755 aaKnown RBP17.4■□□□□ 0.38
LETMD1-220ENST00000549686 PPANQ9NQ55 473 aaKnown RBP17.4■□□□□ 0.38
LETMD1-220ENST00000549686 POLR3BQ9NW08 1133 aaPredicted RBP17.4■□□□□ 0.38
LETMD1-220ENST00000549686 ZFATQ9P243 1243 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 SLC2A6Q9UGQ3 507 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 APPL1Q9UKG1 709 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 IKBKGQ9Y6K9 419 aa17.4■□□□□ 0.38
LETMD1-220ENST00000549686 RASGRF2O14827 1237 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 MID1O15344 667 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 OPA1O60313 960 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 SASH3O75995 380 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 VAPBO95292 243 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 CLDN7O95471 211 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 SHBGP04278 402 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 COL9A1P20849 921 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 P2RY2P41231 377 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 MSH2P43246 934 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 RPS9P46781 194 aaKnown RBP17.39■□□□□ 0.37
LETMD1-220ENST00000549686 STC1P52823 247 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 ZNF844Q08AG5 666 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 CNTN1Q12860 1018 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 POM121L1PQ3SYA9 428 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 TMEM52BQ4KMG9 183 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 KIAA0408Q6ZU52 694 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 USP30Q70CQ3 517 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 MARK2Q7KZI7 788 aaKnown RBP17.39■□□□□ 0.37
LETMD1-220ENST00000549686 SLC26A11Q86WA9 606 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 RASSF3Q86WH2 238 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 CNTN4Q8IWV2 1026 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 HDDC3Q8N4P3 179 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 DTX3LQ8TDB6 740 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 HDAC10Q969S8 669 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 CLDN23Q96B33 292 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 SIPA1Q96FS4 1042 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 CDKN2AIPNLQ96HQ2 116 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 SMIM14Q96QK8 99 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 OMDQ99983 421 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 MKRN2Q9H000 416 aaKnown RBP17.39■□□□□ 0.37
LETMD1-220ENST00000549686 KCTD5Q9NXV2 234 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 PKD2L2Q9NZM6 624 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 TXNDC16Q9P2K2 825 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 NFKBIL1Q9UBC1 381 aaPredicted RBP17.39■□□□□ 0.37
LETMD1-220ENST00000549686 FZD4Q9ULV1 537 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 NCKAP1Q9Y2A7 1128 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 KCTD3Q9Y597 815 aa17.39■□□□□ 0.37
LETMD1-220ENST00000549686 CKAP5Q14008 2032 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 CCDC78A2IDD5 438 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 TSPAN6O43657 245 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 CDH16O75309 829 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 SLC4A1P02730 911 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 C1QAP02745 245 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 INHBAP08476 426 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 ACADMP11310 421 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 LHCGRP22888 699 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 ARNTP27540 789 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 DRD3P35462 400 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 DCDC1P59894 354 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 PTSQ03393 145 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 RALGDSQ12967 914 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 FZD5Q13467 585 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 CEP85LQ5SZL2 805 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 PIP5KL1Q5T9C9 394 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 MRNIPQ6NTE8 343 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 NEPROQ6NW34 567 aa17.38■□□□□ 0.37
LETMD1-220ENST00000549686 Q6ZS52 159 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms