RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 WBP1Q96G27 269 aa20.39■□□□□ 0.85
SSH1-207ENST00000547862 PSKH2Q96QS6 385 aa20.39■□□□□ 0.85
SSH1-207ENST00000547862 PHPT1Q9NRX4 125 aaPredicted RBP20.39■□□□□ 0.85
SSH1-207ENST00000547862 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.39■□□□□ 0.85
SSH1-207ENST00000547862 ETNK2Q9NVF9 386 aa20.39■□□□□ 0.85
SSH1-207ENST00000547862 MYO6Q9UM54 1294 aa20.39■□□□□ 0.85
SSH1-207ENST00000547862 SCINQ9Y6U3 715 aa20.39■□□□□ 0.85
SSH1-207ENST00000547862 TENM4Q6N022 2769 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 PRAMEF33A0A0G2JMD5 474 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.38■□□□□ 0.85
SSH1-207ENST00000547862 CAPN8A6NHC0 703 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 LRRC10BA6NIK2 292 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 DDX3XO00571 662 aaKnown RBP eCLIP20.38■□□□□ 0.85
SSH1-207ENST00000547862 PRAMEF10O60809 474 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 SKILP12757 684 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 IL1R2P27930 398 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 VIPR1P32241 457 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 KLHL30Q0D2K2 578 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 BIRC2Q13490 618 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 HLTFQ14527 1009 aaKnown RBP eCLIP20.38■□□□□ 0.85
SSH1-207ENST00000547862 PTPRRQ15256 657 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 RAET1GQ6H3X3 334 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 TMCO3Q6UWJ1 677 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 PGBD5Q8N414 524 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 ATPAF2Q8N5M1 289 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 KIAA1524Q8TCG1 905 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 COQ10AQ96MF6 247 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 ZMYND15Q9H091 742 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 RDH14Q9HBH5 336 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 RTN4Q9NQC3 1192 aaKnown RBP20.38■□□□□ 0.85
SSH1-207ENST00000547862 APPL1Q9UKG1 709 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 SSUH2Q9Y2M2 353 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 PCDHGA7Q9Y5G6 932 aa20.38■□□□□ 0.85
SSH1-207ENST00000547862 TNFRSF10CO14798 259 aa20.37■□□□□ 0.85
SSH1-207ENST00000547862 HEXIM1O94992 359 aaKnown RBP20.37■□□□□ 0.85
SSH1-207ENST00000547862 CTPS1P17812 591 aa20.37■□□□□ 0.85
SSH1-207ENST00000547862 AK4P27144 223 aaPredicted RBP20.37■□□□□ 0.85
SSH1-207ENST00000547862 ETV3P41162 512 aa20.37■□□□□ 0.85
SSH1-207ENST00000547862 NSUN2Q08J23 767 aaKnown RBP eCLIP20.37■□□□□ 0.85
SSH1-207ENST00000547862 TRAF2Q12933 501 aa20.37■□□□□ 0.85
SSH1-207ENST00000547862 TSR1Q2NL82 804 aaKnown RBP20.37■□□□□ 0.85
SSH1-207ENST00000547862 SLC30A9Q6PML9 568 aa20.37■□□□□ 0.85
SSH1-207ENST00000547862 HSD11B1LQ7Z5J1 315 aa20.37■□□□□ 0.85
SSH1-207ENST00000547862 FNIP1Q8TF40 1166 aa20.37■□□□□ 0.85
SSH1-207ENST00000547862 ZDHHC1Q8WTX9 485 aa20.37■□□□□ 0.85
SSH1-207ENST00000547862 PTCD2Q8WV60 388 aaKnown RBP20.37■□□□□ 0.85
SSH1-207ENST00000547862 MED8Q96G25 268 aa20.37■□□□□ 0.85
SSH1-207ENST00000547862 SEMA6CQ9H3T2 930 aa20.37■□□□□ 0.85
SSH1-207ENST00000547862 SPATS2LQ9NUQ6 558 aaKnown RBP20.37■□□□□ 0.85
SSH1-207ENST00000547862 FOXJ2Q9P0K8 574 aa20.37■□□□□ 0.85
SSH1-207ENST00000547862 PIEZO2Q9H5I5 2752 aa20.37■□□□□ 0.85
SSH1-207ENST00000547862 AHCTF1Q8WYP5 2266 aa20.37■□□□□ 0.85
SSH1-207ENST00000547862 A0A0U1RQS6 177 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 NPIPB15A6NHN6 443 aaPredicted RBP20.36■□□□□ 0.85
SSH1-207ENST00000547862 RHPN2P1A8MT19 583 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 SOCS5O75159 536 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 LIPCP11150 499 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 CYP2A6P11509 494 aaPredicted RBP20.36■□□□□ 0.85
SSH1-207ENST00000547862 LHCGRP22888 699 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 ALDH4A1P30038 563 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 TRIM23P36406 574 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 OR1D5P58170 312 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 ILF3Q12906 894 aaKnown RBP eCLIP20.36■□□□□ 0.85
SSH1-207ENST00000547862 FILIP1LQ4L180 1135 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 TDRD12Q587J7 1177 aaKnown RBP20.36■□□□□ 0.85
SSH1-207ENST00000547862 OGFOD3Q6PK18 319 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 USP53Q70EK8 1073 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 PRICKLE2Q7Z3G6 844 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 TSPAN33Q86UF1 283 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 ZFAND4Q86XD8 727 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 BBS5Q8N3I7 341 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.36■□□□□ 0.85
SSH1-207ENST00000547862 LZTR1Q8N653 840 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 PATE1Q8WXA2 126 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 USP7Q93009 1102 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 DTD2Q96FN9 168 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 ZNF599Q96NL3 588 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 NUDCD1Q96RS6 583 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 GSDMCQ9BYG8 508 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 NAT10Q9H0A0 1025 aaKnown RBP20.36■□□□□ 0.85
SSH1-207ENST00000547862 NOD2Q9HC29 1040 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 CD84Q9UIB8 345 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 SUFUQ9UMX1 484 aa20.36■□□□□ 0.85
SSH1-207ENST00000547862 PDE2AO00408 941 aaPredicted RBP20.35■□□□□ 0.85
SSH1-207ENST00000547862 EFSO43281 561 aa20.35■□□□□ 0.85
SSH1-207ENST00000547862 SLC28A2O43868 658 aa20.35■□□□□ 0.85
SSH1-207ENST00000547862 HOXC4P09017 264 aaPredicted RBP20.35■□□□□ 0.85
SSH1-207ENST00000547862 CCNB1P14635 433 aa20.35■□□□□ 0.85
SSH1-207ENST00000547862 GJC1P36383 396 aa20.35■□□□□ 0.85
SSH1-207ENST00000547862 POLD2P49005 469 aa20.35■□□□□ 0.85
SSH1-207ENST00000547862 PPM1FP49593 454 aaPredicted RBP20.35■□□□□ 0.85
SSH1-207ENST00000547862 ZNF135P52742 658 aaPredicted RBP20.35■□□□□ 0.85
SSH1-207ENST00000547862 CDK3Q00526 305 aa20.35■□□□□ 0.85
SSH1-207ENST00000547862 C16orf72Q14CZ0 275 aa20.35■□□□□ 0.85
SSH1-207ENST00000547862 DPYSL2Q16555 572 aa20.35■□□□□ 0.85
SSH1-207ENST00000547862 MANEAQ5SRI9 462 aa20.35■□□□□ 0.85
SSH1-207ENST00000547862 PSTKQ8IV42 348 aaKnown RBP20.35■□□□□ 0.85
SSH1-207ENST00000547862 SLITRK4Q8IW52 837 aa20.35■□□□□ 0.85
SSH1-207ENST00000547862 RCBTB1Q8NDN9 531 aa20.35■□□□□ 0.85
SSH1-207ENST00000547862 NSMCE1Q8WV22 266 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms