RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 LOC101059948A0A1B0GTJ6 334 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 CFAP69A5D8W1 941 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 GOLGA6L4A6NEF3 574 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 EFCAB7A8K855 629 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 BIN1O00499 593 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 ZW10O43264 779 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 FUCA1P04066 466 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 THRAP10827 490 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 GM2AP17900 193 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 CSF2RBP32927 897 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 STAT1P42224 750 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 GPR3P46089 330 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 MLLT10P55197 1068 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 BPIFB4P59827 614 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 RALGDSQ12967 914 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 SQSTM1Q13501 440 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 CCDC14Q49A88 953 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 DCAF12Q5T6F0 453 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 TAF3Q5VWG9 929 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 ANKS6Q68DC2 871 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 LIPIQ6XZB0 460 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 FAM129CQ86XR2 697 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 CAMK1DQ8IU85 385 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 CREBRFQ8IUR6 639 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 NLGN4XQ8N0W4 816 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 NLGN4YQ8NFZ3 816 aaPredicted RBP12.77□□□□□ -0.37
SCAF11-208ENST00000546534 KIAA1143Q96AT1 154 aaPredicted RBP12.77□□□□□ -0.37
SCAF11-208ENST00000546534 ZNF641Q96N77 438 aaPredicted RBP12.77□□□□□ -0.37
SCAF11-208ENST00000546534 PRR14Q9BWN1 585 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 WDR26Q9H7D7 661 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 CARS2Q9HA77 564 aaKnown RBP12.77□□□□□ -0.37
SCAF11-208ENST00000546534 METTL5Q9NRN9 209 aaKnown RBP12.77□□□□□ -0.37
SCAF11-208ENST00000546534 TAAR2Q9P1P5 351 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 TP53TG5Q9Y2B4 290 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 ICE1Q9Y2F5 2266 aa12.77□□□□□ -0.37
SCAF11-208ENST00000546534 IGHV1OR21-1A0A087WYE8 117 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 GTPBP10A4D1E9 387 aaKnown RBP12.76□□□□□ -0.37
SCAF11-208ENST00000546534 B4E171 279 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 RASA4BC9J798 803 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 K7EM74 188 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 PPM1DO15297 605 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 TEX33O43247 280 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 RASA4O43374 803 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 KRT7P08729 469 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 CYP11B1P15538 503 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 NR1D1P20393 614 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 AK4P27144 223 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-208ENST00000546534 MAP4P27816 1152 aaKnown RBP12.76□□□□□ -0.37
SCAF11-208ENST00000546534 TSPAN7P41732 249 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 ILF3Q12906 894 aaKnown RBP eCLIP12.76□□□□□ -0.37
SCAF11-208ENST00000546534 BIRC2Q13490 618 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 GRM3Q14832 879 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 CFAP58Q5T655 872 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 ATP1A1-AS1Q5TC04 95 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 TIPARPQ7Z3E1 657 aaKnown RBP12.76□□□□□ -0.37
SCAF11-208ENST00000546534 PHLDB2Q86SQ0 1253 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 DNAAF5Q86Y56 855 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 CCDC185Q8N715 623 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 RTL3Q8N8U3 475 aaKnown RBP12.76□□□□□ -0.37
SCAF11-208ENST00000546534 BMPERQ8N8U9 685 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 RXFP2Q8WXD0 754 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 CPA5Q8WXQ8 436 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 RTP4Q96DX8 246 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 GSDMCQ9BYG8 508 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 ST14Q9Y5Y6 855 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 ANKRD36A6QL64 1941 aa12.76□□□□□ -0.37
SCAF11-208ENST00000546534 ENO4A6NNW6 628 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 PDE2AO00408 941 aaPredicted RBP12.75□□□□□ -0.37
SCAF11-208ENST00000546534 AGFG2O95081 481 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 FGFR1OPO95684 399 aaKnown RBP12.75□□□□□ -0.37
SCAF11-208ENST00000546534 LSM8O95777 96 aaKnown RBP12.75□□□□□ -0.37
SCAF11-208ENST00000546534 ELFN1P0C7U0 828 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 RGRP47804 291 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 UQCRFS1P47985 274 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 YBEYP58557 167 aaPredicted RBP12.75□□□□□ -0.37
SCAF11-208ENST00000546534 RAB15P59190 212 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 SEPT6Q14141 434 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 NAA35Q5VZE5 725 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 PNCKQ6P2M8 343 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 C16orf46Q6P387 395 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 TMEM71Q6P5X7 295 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 SLC30A9Q6PML9 568 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 NAGSQ8N159 534 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 PYROXD2Q8N2H3 581 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 GPT2Q8TD30 523 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 ARHGEF17Q96PE2 2063 aaPredicted RBP12.75□□□□□ -0.37
SCAF11-208ENST00000546534 TEFMQ96QE5 360 aaKnown RBP12.75□□□□□ -0.37
SCAF11-208ENST00000546534 CTRCQ99895 268 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 EFHD1Q9BUP0 239 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 TRNAU1APQ9NX07 287 aaKnown RBP12.75□□□□□ -0.37
SCAF11-208ENST00000546534 KCNK4Q9NYG8 393 aa12.75□□□□□ -0.37
SCAF11-208ENST00000546534 CREBBPQ92793 2442 aa12.74□□□□□ -0.37
SCAF11-208ENST00000546534 A8MX80 341 aa12.74□□□□□ -0.37
SCAF11-208ENST00000546534 CEACAM5P06731 702 aa12.74□□□□□ -0.37
SCAF11-208ENST00000546534 MYCLP1P12525 358 aaPredicted RBP12.74□□□□□ -0.37
SCAF11-208ENST00000546534 TCN2P20062 427 aa12.74□□□□□ -0.37
SCAF11-208ENST00000546534 EPHB2P29323 1055 aa12.74□□□□□ -0.37
SCAF11-208ENST00000546534 SDC4P31431 198 aa12.74□□□□□ -0.37
SCAF11-208ENST00000546534 HDAC4P56524 1084 aa12.74□□□□□ -0.37
SCAF11-208ENST00000546534 NOMO3P69849 1222 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms