RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 MRGPRX2Q96LB1 330 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 COQ10AQ96MF6 247 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 FICDQ9BVA6 458 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 AP1M1Q9BXS5 423 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 KCTD5Q9NXV2 234 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 GOLGA6AQ9NYA3 693 aa16.84■□□□□ 0.29
LTBR-215ENST00000546296 CDV3Q9UKY7 258 aaKnown RBP16.84■□□□□ 0.29
LTBR-215ENST00000546296 TTC7AQ9ULT0 858 aaPredicted RBP16.84■□□□□ 0.29
LTBR-215ENST00000546296 LOC285095A0A1B0GVY8 99 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 CES2O00748 559 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 CDX4O14627 284 aaPredicted RBP16.83■□□□□ 0.28
LTBR-215ENST00000546296 ZNF185O15231 689 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 DFNA5O60443 496 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 AGTP01019 485 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 PIRTP0C851 137 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 SDHBP21912 280 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 IGFALSP35858 605 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 ETV3P41162 512 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 PTSQ03393 145 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 INPP5AQ14642 412 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 RSPO4Q2I0M5 234 aaPredicted RBP16.83■□□□□ 0.28
LTBR-215ENST00000546296 SIRPB2Q5JXA9 342 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 PRAMEF14Q5SWL7 426 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 RALGAPA1Q6GYQ0 2036 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 DRICH1Q6PGQ1 229 aaPredicted RBP16.83■□□□□ 0.28
LTBR-215ENST00000546296 Q6ZVL8 140 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 PRELID2Q8N945 189 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 ACTRT1Q8TDG2 376 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 MAGOHBQ96A72 148 aaKnown RBP16.83■□□□□ 0.28
LTBR-215ENST00000546296 TRIM44Q96DX7 344 aaPredicted RBP16.83■□□□□ 0.28
LTBR-215ENST00000546296 RTP4Q96DX8 246 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 LYSMD1Q96S90 227 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 SRPK1Q96SB4 655 aaKnown RBP16.83■□□□□ 0.28
LTBR-215ENST00000546296 GPR63Q9BZJ6 419 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 IL21RQ9HBE5 538 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 MAGEE1Q9HCI5 957 aa16.83■□□□□ 0.28
LTBR-215ENST00000546296 GOLGA6L10A0A0M3HER8 536 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 PSMD3O43242 534 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 METTL18O95568 372 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 SLC4A1P02730 911 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 HLA-DPA1P20036 260 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 CHRNA4P43681 627 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 KCNJ1P48048 391 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 STC1P52823 247 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 THOP1P52888 689 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 LIMK1P53667 647 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 YPEL5P62699 121 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 SLC1A5Q15758 541 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 FAXCQ5TGI0 409 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 SPATS2Q86XZ4 545 aaKnown RBP16.82■□□□□ 0.28
LTBR-215ENST00000546296 CBARPQ8N350 705 aaPredicted RBP16.82■□□□□ 0.28
LTBR-215ENST00000546296 DTD2Q96FN9 168 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 GORASP1Q9BQQ3 440 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 ZFYVE1Q9HBF4 777 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 SMARCAL1Q9NZC9 954 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 SHOC2Q9UQ13 582 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 SAR1BQ9Y6B6 198 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 ANKRD36A6QL64 1941 aa16.82■□□□□ 0.28
LTBR-215ENST00000546296 LAMA1P25391 3075 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 TOR1BO14657 336 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 FGF1P05230 155 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 C1SP09871 688 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 ATXN1LP0C7T5 689 aaKnown RBP16.81■□□□□ 0.28
LTBR-215ENST00000546296 ETS1P14921 441 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 GM2AP17900 193 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 LMAN1P49257 510 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 ARRB1P49407 418 aaPredicted RBP16.81■□□□□ 0.28
LTBR-215ENST00000546296 PFN3P60673 137 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 MTM1Q13496 603 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 PDE1CQ14123 709 aaPredicted RBP16.81■□□□□ 0.28
LTBR-215ENST00000546296 PTK2BQ14289 1009 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 SPARCL1Q14515 664 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 ZNF423Q2M1K9 1284 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 PAPD7Q5XG87 772 aaKnown RBP16.81■□□□□ 0.28
LTBR-215ENST00000546296 PNCKQ6P2M8 343 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 KDM7AQ6ZMT4 941 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 RFLNAQ6ZTI6 216 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 LYSMD3Q7Z3D4 306 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 TECPR1Q7Z6L1 1165 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 NRSN1Q8IZ57 195 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 OXR1Q8N573 874 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 PLA2G15Q8NCC3 412 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 ATL2Q8NHH9 583 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 CAPZA3Q96KX2 299 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 ELF4Q99607 663 aaPredicted RBP16.81■□□□□ 0.28
LTBR-215ENST00000546296 TBL1YQ9BQ87 522 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 APOL2Q9BQE5 337 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 APOOQ9BUR5 198 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 ERVMER34-1Q9H9K5 563 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 DNAAF2Q9NVR5 837 aaKnown RBP16.81■□□□□ 0.28
LTBR-215ENST00000546296 PKD2L2Q9NZM6 624 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 PAK5Q9P286 719 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 CD84Q9UIB8 345 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 FNDC3AQ9Y2H6 1198 aaKnown RBP16.81■□□□□ 0.28
LTBR-215ENST00000546296 ZNF711Q9Y462 761 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 OR1A2Q9Y585 309 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 PLXNA2O75051 1894 aa16.81■□□□□ 0.28
LTBR-215ENST00000546296 TRPM6Q9BX84 2022 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 E7EVH7 732 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 ZSCAN5DPP0CG00 497 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms