RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 MARSP56192 900 aaKnown RBP9.4□□□□□ -0.9
CHD4-212ENST00000545083 KRT85P78386 507 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 ATP11AP98196 1134 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 MC1RQ01726 317 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 TSR1Q2NL82 804 aaKnown RBP9.4□□□□□ -0.9
CHD4-212ENST00000545083 INO80DQ53TQ3 878 aaPredicted RBP9.4□□□□□ -0.9
CHD4-212ENST00000545083 SNAP47Q5SQN1 464 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 KLHL10Q6JEL2 608 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 ERAP2Q6P179 960 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 LIPIQ6XZB0 460 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 MAMDC2Q7Z304 686 aaPredicted RBP9.4□□□□□ -0.9
CHD4-212ENST00000545083 ARHGAP22Q7Z5H3 698 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 PHLDB2Q86SQ0 1253 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 CAMK1DQ8IU85 385 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 FAM114A1Q8IWE2 563 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 EMC1Q8N766 993 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 EFCAB3Q8N7B9 438 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 HCAR2Q8TDS4 363 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 C18orf8Q96DM3 657 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 DHTKD1Q96HY7 919 aaPredicted RBP9.4□□□□□ -0.9
CHD4-212ENST00000545083 TEFMQ96QE5 360 aaKnown RBP9.4□□□□□ -0.9
CHD4-212ENST00000545083 NCAPGQ9BPX3 1015 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 GSDMCQ9BYG8 508 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 WDR26Q9H7D7 661 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 CUEDC1Q9NWM3 386 aaPredicted RBP9.4□□□□□ -0.9
CHD4-212ENST00000545083 PLEKHM1Q9Y4G2 1056 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 KCTD3Q9Y597 815 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.4□□□□□ -0.9
CHD4-212ENST00000545083 RPS6KL1Q9Y6S9 549 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 SETD2Q9BYW2 2564 aaPredicted RBP9.4□□□□□ -0.9
CHD4-212ENST00000545083 ITPR3Q14573 2671 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 CFAP69A5D8W1 941 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 ZSCAN5CA6NGD5 496 aaPredicted RBP9.39□□□□□ -0.91
CHD4-212ENST00000545083 PPP1R3GB7ZBB8 358 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 FOXN3O00409 490 aaPredicted RBP9.39□□□□□ -0.91
CHD4-212ENST00000545083 ZW10O43264 779 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 RFPL1O75677 317 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 DNAJB5O75953 348 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 CEACAM5P06731 702 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 MYCLP1P12525 358 aaPredicted RBP9.39□□□□□ -0.91
CHD4-212ENST00000545083 ZNF28P17035 718 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 CDH5P33151 784 aaPredicted RBP9.39□□□□□ -0.91
CHD4-212ENST00000545083 GNPDA1P46926 289 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 RGRP47804 291 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 STX17P56962 302 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 SNX16P57768 344 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 CTBSQ01459 385 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 PTK2Q05397 1052 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 ILF3Q12906 894 aaKnown RBP eCLIP9.39□□□□□ -0.91
CHD4-212ENST00000545083 MRPL49Q13405 166 aaKnown RBP9.39□□□□□ -0.91
CHD4-212ENST00000545083 BIRC2Q13490 618 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 ERV3-1Q14264 604 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 C15orf59Q2T9L4 293 aaPredicted RBP9.39□□□□□ -0.91
CHD4-212ENST00000545083 EIF2S3LQ2VIR3 472 aaKnown RBP9.39□□□□□ -0.91
CHD4-212ENST00000545083 PRR30Q53SZ7 412 aaPredicted RBP9.39□□□□□ -0.91
CHD4-212ENST00000545083 AFMIDQ63HM1 303 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 PNCKQ6P2M8 343 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 BRAT1Q6PJG6 821 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 CEACAM20Q6UY09 585 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 ZNF354CQ86Y25 554 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 SRRM1Q8IYB3 904 aaKnown RBP9.39□□□□□ -0.91
CHD4-212ENST00000545083 FMR1NBQ8N0W7 255 aaPredicted RBP9.39□□□□□ -0.91
CHD4-212ENST00000545083 CCDC185Q8N715 623 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 NELFBQ8WX92 580 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 CASKIN2Q8WXE0 1202 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 TBC1D31Q96DN5 1066 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 NSMCE3Q96MG7 304 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 DPYSL5Q9BPU6 564 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 FRMD8Q9BZ67 464 aaPredicted RBP9.39□□□□□ -0.91
CHD4-212ENST00000545083 GDPD2Q9HCC8 539 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 CASS4Q9NQ75 786 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 FBXO8Q9NRD0 319 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 TRNAU1APQ9NX07 287 aaKnown RBP9.39□□□□□ -0.91
CHD4-212ENST00000545083 APEX2Q9UBZ4 518 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 SUFUQ9UMX1 484 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 MAP4K5Q9Y4K4 846 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 F8P00451 2351 aa9.39□□□□□ -0.91
CHD4-212ENST00000545083 TRBV23OR9-2A0A075B6M9 112 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 A8MX80 341 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 RASA4BC9J798 803 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 RASA4O43374 803 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 SORBS2O94875 1100 aaKnown RBP9.38□□□□□ -0.91
CHD4-212ENST00000545083 SMC2O95347 1197 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 DDAH2O95865 285 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 PLEKP08567 350 aaPredicted RBP9.38□□□□□ -0.91
CHD4-212ENST00000545083 ELFN1P0C7U0 828 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 ADCY8P40145 1251 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 POLD2P49005 469 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 COPB1P53618 953 aaKnown RBP9.38□□□□□ -0.91
CHD4-212ENST00000545083 PMS2P54278 862 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 RIPPLY3P57055 190 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 GPLD1P80108 840 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 STIM1Q13586 685 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 CDO1Q16878 200 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 NADK2Q4G0N4 442 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 DNAAF5Q86Y56 855 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 ESX1Q8N693 406 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 TMEM35BQ8NCS4 154 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 SLC37A2Q8TED4 501 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 SMARCE1Q969G3 411 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms