RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 NAXDQ8IW45 347 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 TP53INP2Q8IXH6 220 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 TXLNBQ8N3L3 684 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 TMEM145Q8NBT3 493 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 ELOA3Q8NG57 546 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 PCDH19Q8TAB3 1148 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 FAF2Q96CS3 445 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 ZNF830Q96NB3 372 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-224ENST00000544990 LENG8Q96PV6 779 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-224ENST00000544990 RNF157Q96PX1 679 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 TCF12Q99081 682 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 MYOCQ99972 504 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 RASSF4Q9H2L5 321 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 ERVMER34-1Q9H9K5 563 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 GGT7Q9UJ14 662 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 DCHS1Q96JQ0 3298 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 WDR87Q6ZQQ6 2873 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 TDRD6O60522 2096 aaKnown RBP7.42□□□□□ -1.22
CPSF7-224ENST00000544990 CABIN1Q9Y6J0 2220 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 A0A096LPE4 126 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 A0A1W2PPZ6 126 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 TSPAN11A1L157 253 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 IGLON5A6NGN9 336 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 AREL1O15033 823 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 MATN3O15232 486 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 PSTPIP1O43586 416 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 MFSD11O43934 449 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 BUB1BO60566 1050 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-224ENST00000544990 KRT1P04264 644 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 ITGAVP06756 1048 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 TNNT1P13805 278 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 ACPPP15309 386 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 COMTP21964 271 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 CDC25BP30305 580 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 GRK6P43250 576 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 RABIFP47224 123 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 RGRP47804 291 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 RXRGP48443 463 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 NAP1L1P55209 391 aaKnown RBP7.42□□□□□ -1.22
CPSF7-224ENST00000544990 SIM1P81133 766 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-224ENST00000544990 ITKQ08881 620 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 GALNT2Q10471 571 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 TRIP6Q15654 476 aaKnown RBP7.42□□□□□ -1.22
CPSF7-224ENST00000544990 TMEM52BQ4KMG9 183 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 MEI1Q5TIA1 1274 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 BZW1Q7L1Q6 419 aaKnown RBP7.42□□□□□ -1.22
CPSF7-224ENST00000544990 ABI3BPQ7Z7G0 1075 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 CAMK1DQ8IU85 385 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 NDUFAF2Q8N183 169 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 CACTIN-AS1Q8N1I8 211 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 CCNYQ8ND76 341 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 DENND6BQ8NEG7 585 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 RAPGEF5Q92565 580 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 VOPP1Q96AW1 172 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 TSGA13Q96PP4 275 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 NUDCD1Q96RS6 583 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 CDC6Q99741 560 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 BAG1Q99933 345 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-224ENST00000544990 MGME1Q9BQP7 344 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 BHLHE41Q9C0J9 482 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-224ENST00000544990 FZD3Q9NPG1 666 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 KLHL11Q9NVR0 708 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 AMACRQ9UHK6 382 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 PCOLCE2Q9UKZ9 415 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 ITM2BQ9Y287 266 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 CA5BQ9Y2D0 317 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.42□□□□□ -1.22
CPSF7-224ENST00000544990 ALG6Q9Y672 507 aa7.42□□□□□ -1.22
CPSF7-224ENST00000544990 CNOT1A5YKK6 2376 aaKnown RBP7.42□□□□□ -1.22
CPSF7-224ENST00000544990 DMXL1Q9Y485 3027 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 LRRK1Q38SD2 2015 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 SPAARA0A1B0GVQ0 90 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 CFAP69A5D8W1 941 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 TRAFD1O14545 582 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-224ENST00000544990 TOR1BO14657 336 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 APOL1O14791 398 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 MUSKO15146 869 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 SOCS5O75159 536 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 RGS9O75916 674 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-224ENST00000544990 ZRANB2O95218 330 aaKnown RBP eCLIP7.41□□□□□ -1.22
CPSF7-224ENST00000544990 TRIM16O95361 564 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 PEX11BO96011 259 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 VSIG8P0DPA2 414 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 KRT10P13645 584 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 CR2P20023 1033 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 CA4P22748 312 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 CLDN2P57739 230 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 FAM193AP78312 1265 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 IL9RQ01113 521 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 SRSF11Q05519 484 aaKnown RBP7.41□□□□□ -1.22
CPSF7-224ENST00000544990 PWP1Q13610 501 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 TFDP2Q14188 446 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 PTK2BQ14289 1009 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 FGL2Q14314 439 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 HS1BP3Q53T59 392 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 LRRC73Q5JTD7 316 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 PRAMEF14Q5SWL7 426 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 SLC9A4Q6AI14 798 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 C11orf63Q6NUN7 778 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 KYAT3Q6YP21 454 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms