RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ZDHHC2Q9UIJ5 367 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.08■□□□□ 0.32
PTPRO-209ENST00000543886 SH3BP1Q9Y3L3 701 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 L3MBTL1Q9Y468 752 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 ANKRD36A6QL64 1941 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 BPTFQ12830 3046 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 NEMP2A6NFY4 417 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 A8MT66 165 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 ANKRD66B4E2M5 251 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 F8W8V4 182 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 NEMP1O14524 444 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 IPO13O94829 963 aaKnown RBP17.07■□□□□ 0.32
PTPRO-209ENST00000543886 COPAP53621 1224 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 TRAF2Q12933 501 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 GAREM2Q75VX8 874 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 SLC22A9Q8IVM8 553 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 FAM217AQ8IXS0 508 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 ELMOD1Q8N336 334 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 FBXO27Q8NI29 283 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 DDI1Q8WTU0 396 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 CMTM5Q96DZ9 223 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 GCNAQ96QF7 691 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 C1orf21Q9H246 121 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 POPDC3Q9HBV1 291 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 CFAP97Q9P2B7 532 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 PCDH10Q9P2E7 1040 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 ZNF510Q9Y2H8 683 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 FCF1Q9Y324 198 aaKnown RBP17.07■□□□□ 0.32
PTPRO-209ENST00000543886 OR51B4Q9Y5P0 310 aa17.07■□□□□ 0.32
PTPRO-209ENST00000543886 PTPRSQ13332 1948 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 GOLGA8QA0A0J9YX86 632 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 UBA6A0AVT1 1052 aaPredicted RBP17.06■□□□□ 0.32
PTPRO-209ENST00000543886 GOLGA8OA6NCC3 632 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 GOLGA8NF8WBI6 632 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 GFRA2O00451 464 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 DCXO43602 365 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 KIF1CO43896 1103 aaKnown RBP17.06■□□□□ 0.32
PTPRO-209ENST00000543886 PEX11AO75192 247 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 ABL2P42684 1182 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 PDAP1Q13442 181 aaKnown RBP17.06■□□□□ 0.32
PTPRO-209ENST00000543886 TMEM207Q6UWW9 146 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 SPNS2Q8IVW8 549 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 HS6ST3Q8IZP7 471 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 WFDC5Q8TCV5 224 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 PPP1R36Q96LQ0 422 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 OR52B2Q96RD2 323 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 AARSD1Q9BTE6 412 aaKnown RBP17.06■□□□□ 0.32
PTPRO-209ENST00000543886 NUF2Q9BZD4 464 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 CCDC68Q9H2F9 335 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 ALG9Q9H6U8 611 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 RNPEPL1Q9HAU8 725 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 GTSE1Q9NYZ3 720 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 CDYLQ9Y232 598 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 TRAV19A0A0A6YYK7 116 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 GRID2O43424 1007 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 MAGEC1O60732 1142 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 NDUFS3O75489 264 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 CXCL14O95715 111 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 ADH1AP07327 375 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 C8AP07357 584 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 GM2AP17900 193 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 RALGPS1Q5JS13 557 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 FBXO46Q6PJ61 603 aaPredicted RBP17.06■□□□□ 0.32
PTPRO-209ENST00000543886 TMC8Q8IU68 726 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 POU5F2Q8N7G0 328 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 SMIM14Q96QK8 99 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 C2orf49Q9BVC5 232 aaPredicted RBP17.06■□□□□ 0.32
PTPRO-209ENST00000543886 WDR55Q9H6Y2 383 aaPredicted RBP17.06■□□□□ 0.32
PTPRO-209ENST00000543886 EML4Q9HC35 981 aaKnown RBP17.06■□□□□ 0.32
PTPRO-209ENST00000543886 IL23AQ9NPF7 189 aa17.06■□□□□ 0.32
PTPRO-209ENST00000543886 POLR3BQ9NW08 1133 aaPredicted RBP17.06■□□□□ 0.32
PTPRO-209ENST00000543886 NOP53Q9NZM5 478 aaKnown RBP17.06■□□□□ 0.32
PTPRO-209ENST00000543886 MEI4A8MW99 385 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 ENTPD5O75356 428 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 LMNAP02545 664 aaKnown RBP17.05■□□□□ 0.32
PTPRO-209ENST00000543886 PRSS56P0CW18 603 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 SUOXP51687 545 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 EPHB1P54762 984 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 SLC7A9P82251 487 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 SH2D4BQ5SQS7 431 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 ATXN7L2Q5T6C5 722 aaPredicted RBP17.05■□□□□ 0.32
PTPRO-209ENST00000543886 RETSATQ6NUM9 610 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 AFAP1L2Q8N4X5 818 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 STON2Q8WXE9 905 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 N4BP2L2Q92802 583 aaPredicted RBP17.05■□□□□ 0.32
PTPRO-209ENST00000543886 ARMC5Q96C12 935 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 FAM161BQ96MY7 647 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 TCF12Q99081 682 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 ZBED2Q9BTP6 218 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 WBP1LQ9NX94 342 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 HACD3Q9P035 362 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 PLA2G4CQ9UP65 541 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 VPS9D1Q9Y2B5 631 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 TRPC5OSA6NMA1 111 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 PFDN6O15212 129 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 STX7O15400 261 aaKnown RBP17.05■□□□□ 0.32
PTPRO-209ENST00000543886 RHOBTB1O94844 696 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 ZNF37AP17032 561 aaPredicted RBP17.05■□□□□ 0.32
PTPRO-209ENST00000543886 KCNA5P22460 613 aa17.05■□□□□ 0.32
PTPRO-209ENST00000543886 PSMA3P25788 255 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms