RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.96□□□□□ -0.336e-9■■■□□ 15.4
TUBGCP2-210ENST00000543663 OR6B1O95007 311 aa12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 CLIC3O95833 236 aa12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 ALDH2P05091 517 aa12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 MMP3P08254 477 aa12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 FUT4P22083 530 aa12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 GPD2P43304 727 aa12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 PSEN1P49768 467 aa12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 PRKG2Q13237 762 aa12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 SOWAHAQ2M3V2 549 aa12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 AAGABQ6PD74 315 aa12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 ZNF467Q7Z7K2 595 aaPredicted RBP12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 FNIP1Q8TF40 1166 aa12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 TRIM8Q9BZR9 551 aa12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 KRT84Q9NSB2 600 aa12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 CYTH4Q9UIA0 394 aa12.96□□□□□ -0.33
TUBGCP2-210ENST00000543663 TRIM43BA6NCK2 446 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 MEIS3P2A8K0S8 358 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 RAD51BO15315 384 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 MAGEC1O60732 1142 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 POLD2P49005 469 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 PRKAG1P54619 331 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 DSC2Q02487 901 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 MSLNQ13421 630 aaPredicted RBP12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 C9orf57Q5W0N0 161 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 USP50Q70EL3 339 aaPredicted RBP12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 BBS7Q8IWZ6 715 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 PTCD3Q96EY7 689 aaKnown RBP12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 TCF12Q99081 682 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 FZD8Q9H461 694 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 STN1Q9H668 368 aaKnown RBP12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 CLK4Q9HAZ1 481 aaKnown RBP12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 AMBNQ9NP70 447 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 PCDH12Q9NPG4 1184 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 SELENONQ9NZV5 590 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 TMCC3Q9ULS5 477 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 PCDHB5Q9Y5E4 795 aa12.96□□□□□ -0.34
TUBGCP2-210ENST00000543663 TFECO14948 347 aaPredicted RBP12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 SIX3O95343 332 aaPredicted RBP12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 KLRC2P26717 231 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 PBX3P40426 434 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 ACTR3P61158 418 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 PITX1P78337 314 aaPredicted RBP12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 SNX17Q15036 470 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 CNPY1Q3B7I2 92 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 DUSP28Q4G0W2 176 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 STXBP5Q5T5C0 1151 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 SFRP1Q8N474 314 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 POC5Q8NA72 575 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 HTRA1Q92743 480 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 PHF21AQ96BD5 680 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 OTUB1Q96FW1 271 aaPredicted RBP12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 ABHD8Q96I13 439 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 MAML3Q96JK9 1138 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 GIMAP2Q9UG22 337 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 AXIN1O15169 862 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 PSMD7P51665 324 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 SQLEQ14534 574 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 ANGPT1Q15389 498 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 PAGE2BQ5JRK9 111 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 DDI2Q5TDH0 399 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 ABRAXAS1Q6UWZ7 409 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 TRMT11Q7Z4G4 463 aaKnown RBP12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 ANKRD46Q86W74 232 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 DENND1CQ8IV53 801 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 CLYBLQ8N0X4 340 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 ZNF540Q8NDQ6 660 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 NPLOC4Q8TAT6 608 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 PANX3Q96QZ0 392 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 RTKNQ9BST9 563 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 DUSP16Q9BY84 665 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 GLOD4Q9HC38 313 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 TLR8Q9NR97 1041 aaKnown RBP12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 PIPSLA2A3N6 862 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 TMEM114B3SHH9 223 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 CYP7B1O75881 506 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 ZNF7P17097 686 aaPredicted RBP12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 HDCP19113 662 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 CRY1Q16526 586 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 NOL9Q5SY16 702 aaKnown RBP12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 ZNF280DQ6N043 979 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 PLEKHM3Q6ZWE6 761 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 GRIN3AQ8TCU5 1115 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 TEKT5Q96M29 485 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 ACAT2Q9BWD1 397 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 CXCL16Q9H2A7 254 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 MIEF1Q9NQG6 463 aa12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 CDV3Q9UKY7 258 aaKnown RBP12.95□□□□□ -0.34
TUBGCP2-210ENST00000543663 LINGO4Q6UY18 593 aa12.94□□□□□ -0.34
TUBGCP2-210ENST00000543663 ATG14Q6ZNE5 492 aa12.94□□□□□ -0.34
TUBGCP2-210ENST00000543663 TDRPQ86YL5 185 aa12.94□□□□□ -0.34
TUBGCP2-210ENST00000543663 HIPK1Q86Z02 1210 aa12.94□□□□□ -0.34
TUBGCP2-210ENST00000543663 SYT12Q8IV01 421 aa12.94□□□□□ -0.34
TUBGCP2-210ENST00000543663 WDTC1Q8N5D0 677 aa12.94□□□□□ -0.34
TUBGCP2-210ENST00000543663 LZTR1Q8N653 840 aa12.94□□□□□ -0.34
TUBGCP2-210ENST00000543663 OR4K2Q8NGD2 314 aa12.94□□□□□ -0.34
TUBGCP2-210ENST00000543663 HEXDCQ8WVB3 486 aa12.94□□□□□ -0.34
TUBGCP2-210ENST00000543663 STRA6Q9BX79 667 aa12.94□□□□□ -0.34
TUBGCP2-210ENST00000543663 IPPQ9Y573 584 aa12.94□□□□□ -0.34
TUBGCP2-210ENST00000543663 GRIN3BO60391 1043 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms