RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 CCDC15Q0P6D6 951 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 ELP6Q0PNE2 266 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 CNTN1Q12860 1018 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 THOC5Q13769 683 aaKnown RBP10.68□□□□□ -0.7
DDB1-221ENST00000543162 ARHGEF7Q14155 803 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 PTPRCAPQ14761 206 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 SMAD1Q15797 465 aaKnown RBP10.68□□□□□ -0.7
DDB1-221ENST00000543162 CDKN3Q16667 212 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 KBTBD12Q3ZCT8 623 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 CEP85LQ5SZL2 805 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 LRRC66Q68CR7 880 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 ZNF449Q6P9G9 518 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 DPPA4Q7L190 304 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 TSPAN33Q86UF1 283 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 KCNMB4Q86W47 210 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 RASSF3Q86WH2 238 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 TMPRSS6Q8IU80 811 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 CTAGE3PQ8IX95 158 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 UNC5BQ8IZJ1 945 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 HDDC3Q8N4P3 179 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 OR13C4Q8NGS5 318 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 OR13J1Q8NGT2 312 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 OR6P1Q8NGX9 317 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 GANCQ8TET4 914 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 HDAC10Q969S8 669 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 RAB7BQ96AH8 199 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 NECAB3Q96P71 396 aaPredicted RBP10.68□□□□□ -0.7
DDB1-221ENST00000543162 MKRN2Q9H000 416 aaKnown RBP10.68□□□□□ -0.7
DDB1-221ENST00000543162 PPCSQ9HAB8 311 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 BPIFA1Q9NP55 256 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 IL1RAPL1Q9NZN1 696 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 IL17CQ9P0M4 197 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 ZFATQ9P243 1243 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 SPTBN5Q9NRC6 3674 aaKnown RBP10.68□□□□□ -0.7
DDB1-221ENST00000543162 TCRBV21S2A2A0A5A6 115 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 TLDC2A0PJX2 215 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 CCDC162PA2VCL2 907 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 SMIM23A6NLE4 172 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 NEMP1O14524 444 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 RASGRF2O14827 1237 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 TCEA3O75764 348 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 RNASEH2AO75792 299 aaKnown RBP10.67□□□□□ -0.7
DDB1-221ENST00000543162 PIAS1O75925 651 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 ZNF30P17039 623 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 LHCGRP22888 699 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 PSMA3P25788 255 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 ARNTP27540 789 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 DRD3P35462 400 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 MMP12P39900 470 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 ARCN1P48444 511 aaKnown RBP10.67□□□□□ -0.7
DDB1-221ENST00000543162 ARSDP51689 593 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 DGKEP52429 567 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 STC1P52823 247 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 ZXDAP98168 799 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 ZBTB16Q05516 673 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 SFSWAPQ12872 951 aaKnown RBP10.67□□□□□ -0.7
DDB1-221ENST00000543162 NAB1Q13506 487 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 EFTUD2Q15029 972 aaKnown RBP eCLIP10.67□□□□□ -0.79e-7■■■□□ 17.7
DDB1-221ENST00000543162 CRY1Q16526 586 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 KRT71Q3SY84 523 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 TTC31Q49AM3 519 aaPredicted RBP10.67□□□□□ -0.7
DDB1-221ENST00000543162 HSP90AA5PQ58FG0 334 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 NEPROQ6NW34 567 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 TMEM92Q6UXU6 159 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.67□□□□□ -0.7
DDB1-221ENST00000543162 TRIM67Q6ZTA4 783 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 SYT13Q7L8C5 426 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 CROCCP2Q86T23 111 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 LRRC6Q86X45 466 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 AADATQ8N5Z0 425 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 PPM1NQ8N819 430 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 FLCNQ8NFG4 579 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 GABPB2Q8TAK5 448 aaPredicted RBP10.67□□□□□ -0.7
DDB1-221ENST00000543162 CALML6Q8TD86 181 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 EPS8L3Q8TE67 593 aaKnown RBP10.67□□□□□ -0.7
DDB1-221ENST00000543162 ZBTB9Q96C00 473 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 EID2BQ96D98 161 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 MRRFQ96E11 262 aaKnown RBP10.67□□□□□ -0.7
DDB1-221ENST00000543162 SIPA1Q96FS4 1042 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 CDKN2AIPNLQ96HQ2 116 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 TBATAQ96M53 351 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 OMDQ99983 421 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 C19orf43Q9BQ61 176 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 FAM167BQ9BTA0 163 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 TMEM109Q9BVC6 243 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 OSBPL6Q9BZF3 934 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 ROPN1BQ9BZX4 212 aaPredicted RBP10.67□□□□□ -0.7
DDB1-221ENST00000543162 SLC6A17Q9H1V8 727 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 ROPN1Q9HAT0 212 aaPredicted RBP10.67□□□□□ -0.7
DDB1-221ENST00000543162 CD248Q9HCU0 757 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 POLMQ9NP87 494 aaPredicted RBP10.67□□□□□ -0.7
DDB1-221ENST00000543162 FBXL12Q9NXK8 326 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 VPS18Q9P253 973 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 FETUBQ9UGM5 382 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 SLC24A2Q9UI40 661 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 FKBPLQ9UIM3 349 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 SCML1Q9UN30 329 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 ITM2BQ9Y287 266 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 IKBKGQ9Y6K9 419 aa10.67□□□□□ -0.7
DDB1-221ENST00000543162 A0A1W2PP55 124 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms