RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 TWIST2Q8WVJ9 160 aa8.22□□□□□ -1.09
PRKAB1-207ENST00000542698 CENPNQ96H22 339 aaPredicted RBP8.22□□□□□ -1.09
PRKAB1-207ENST00000542698 FOPNLQ96NB1 174 aa8.22□□□□□ -1.09
PRKAB1-207ENST00000542698 ZMAT2Q96NC0 199 aaKnown RBP8.22□□□□□ -1.09
PRKAB1-207ENST00000542698 FCRL5Q96RD9 977 aa8.22□□□□□ -1.09
PRKAB1-207ENST00000542698 PDGFDQ9GZP0 370 aaPredicted RBP8.22□□□□□ -1.09
PRKAB1-207ENST00000542698 CXorf21Q9HAI6 301 aa8.22□□□□□ -1.09
PRKAB1-207ENST00000542698 ZBTB26Q9HCK0 441 aa8.22□□□□□ -1.09
PRKAB1-207ENST00000542698 HMG20AQ9NP66 347 aa8.22□□□□□ -1.09
PRKAB1-207ENST00000542698 HPS4Q9NQG7 708 aa8.22□□□□□ -1.09
PRKAB1-207ENST00000542698 TRPM5Q9NZQ8 1165 aa8.22□□□□□ -1.09
PRKAB1-207ENST00000542698 KANSL3Q9P2N6 904 aa8.22□□□□□ -1.09
PRKAB1-207ENST00000542698 TIMM22Q9Y584 194 aa8.22□□□□□ -1.09
PRKAB1-207ENST00000542698 ARAP2Q8WZ64 1704 aa8.22□□□□□ -1.09
PRKAB1-207ENST00000542698 KCNH1O95259 989 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 STAU1O95793 577 aaKnown RBP8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 HCAR3P49019 387 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 PRIM2P49643 509 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 RPL26P61254 145 aaKnown RBP8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 TSTD2Q5T7W7 516 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 SDHAF4Q5VUM1 108 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 ARMC3Q5W041 872 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 TMEM26Q6ZUK4 368 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 HFE2Q6ZVN8 426 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 STK40Q8N2I9 435 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 AADATQ8N5Z0 425 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 CANT1Q8WVQ1 401 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 IRGQQ8WZA9 623 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 ROPN1LQ96C74 230 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 RTP4Q96DX8 246 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 C8orf4Q9NR00 106 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 TMEM161AQ9NX61 479 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 OPTCQ9UBM4 332 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 SPASTQ9UBP0 616 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 KLQ9UEF7 1012 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 ADAMTS6Q9UKP5 1117 aa8.21□□□□□ -1.09
PRKAB1-207ENST00000542698 TMEM233B4DJY2 109 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 E7ENX8 843 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 CLCNKBP51801 687 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 MRPS6P82932 125 aaKnown RBP8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 RHDQ02161 417 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 RUNX1T1Q06455 604 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 GLYATQ6IB77 296 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 TXNDC11Q6PKC3 985 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 CARNMT1Q8N4J0 409 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 BPIFB6Q8NFQ5 453 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 PCDHB7Q9Y5E2 793 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 SLC7A4O43246 635 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 ULK1O75385 1050 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 BCAS2O75934 225 aaPredicted RBP8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 CPSF4O95639 269 aaKnown RBP8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 MT-ND1P03886 318 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 PABPC4LP0CB38 370 aaKnown RBP8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 HALP42357 657 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 TRAP1Q12931 704 aaKnown RBP8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 DGCR6Q14129 220 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 GALNT3Q14435 633 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 DDR2Q16832 855 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 RGS21Q2M5E4 152 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 ZNF618Q5T7W0 954 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 RRM2BQ7LG56 351 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 LEMD2Q8NC56 503 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 PPM1MQ96MI6 270 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 SLC39A8Q9C0K1 460 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 RNF39Q9H2S5 420 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 USE1Q9NZ43 259 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 BCORQ6W2J9 1755 aa8.21□□□□□ -1.1
PRKAB1-207ENST00000542698 IGKV6-21A0A0C4DH24 114 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 E9PAM4 449 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 CBFA2T3O75081 653 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 CST1P01037 141 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 GPIP06744 558 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 LPOP22079 712 aaPredicted RBP8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 HTR7P34969 479 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 PPP3CCP48454 512 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 ALDH7A1P49419 539 aaKnown RBP8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 ST13P50502 369 aaKnown RBP8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 DSC2Q02487 901 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 FBXO48Q5FWF7 155 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 AFTPHQ6ULP2 937 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 GCNT7Q6ZNI0 430 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 PROSER1Q86XN7 944 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 NRG4Q8WWG1 115 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 SEPT8Q92599 483 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 GATA6Q92908 595 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 EXOC2Q96KP1 924 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 PPP3R2Q96LZ3 170 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 APOL4Q9BPW4 351 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 ADI1Q9BV57 179 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 RAD21L1Q9H4I0 556 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 SMPD3Q9NY59 655 aaPredicted RBP8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 EURLQ9NYK6 297 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 CNTN3Q9P232 1028 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 TBC1D30Q9Y2I9 924 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 AP3M1Q9Y2T2 418 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 DOCK2Q92608 1830 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 A0A0G2JLL6 359 aaPredicted RBP8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 C5orf58C9J3I9 102 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 H7C4K7 107 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 NFKBIEO00221 500 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms