RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 WDR49Q8IV35 697 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 BRSK2Q8IWQ3 736 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 FAM186BQ8IYM0 893 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 THNSL1Q8IYQ7 743 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 CSGALNACT2Q8N6G5 542 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 LRRC52Q8N7C0 313 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 PNLDC1Q8NA58 520 aaKnown RBP4.67□□□□□ -1.66
MDM2-228ENST00000542502 APPL2Q8NEU8 664 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 GPT2Q8TD30 523 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 SLC35A4Q96G79 324 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 ZNF668Q96K58 619 aaPredicted RBP4.67□□□□□ -1.66
MDM2-228ENST00000542502 SNX27Q96L92 541 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 C5orf34Q96MH7 638 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 ZNF560Q96MR9 790 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 NT5C1BQ96P26 610 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 CASD1Q96PB1 797 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 BPIFA3Q9BQP9 254 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 FAM213AQ9BRX8 229 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 EIF2AQ9BY44 585 aaKnown RBP4.67□□□□□ -1.66
MDM2-228ENST00000542502 NXF3Q9H4D5 531 aaKnown RBP4.67□□□□□ -1.66
MDM2-228ENST00000542502 THAP9Q9H5L6 903 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 POLD4Q9HCU8 107 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.67□□□□□ -1.66
MDM2-228ENST00000542502 TBC1D13Q9NVG8 400 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 DMAC2Q9NW81 257 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 ARMCX3Q9UH62 379 aaPredicted RBP4.67□□□□□ -1.66
MDM2-228ENST00000542502 MAN1B1Q9UKM7 699 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 ZDHHC8Q9ULC8 765 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 GDAQ9Y2T3 454 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 DAAM1Q9Y4D1 1078 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 PCDHGB6Q9Y5F9 930 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 TRIP11Q15643 1979 aa4.67□□□□□ -1.66
MDM2-228ENST00000542502 SF3B1O75533 1304 aaKnown RBP eCLIP4.67□□□□□ -1.666e-7■■■■■ 32.6
MDM2-228ENST00000542502 PDCD11Q14690 1871 aaKnown RBP4.66□□□□□ -1.66
MDM2-228ENST00000542502 NLRC5Q86WI3 1866 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 LINC01553A4QN01 128 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 BECN2A8MW95 431 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 ANKRD63C9JTQ0 380 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 GOLGA6L19H0YKK7 550 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 H3BNC9 293 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 H7C4K7 107 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 SYN3O14994 580 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 FAM189A1O60320 539 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 ZC3H11AO75152 810 aaKnown RBP eCLIP4.66□□□□□ -1.66
MDM2-228ENST00000542502 TPM3P06753 285 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 CA3P07451 260 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 HARSP12081 509 aaKnown RBP4.66□□□□□ -1.66
MDM2-228ENST00000542502 TYRP14679 529 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 TNNI1P19237 187 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 LRPAP1P30533 357 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 CTNNB1P35222 781 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 HOXD13P35453 343 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 MLH1P40692 756 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 ACOT2P49753 483 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 CYP2J2P51589 502 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 VAMP7P51809 220 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
MDM2-228ENST00000542502 RBP5P82980 135 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 MYL5Q02045 173 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 CYP24A1Q07973 514 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 DSC1Q08554 894 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 BFSP1Q12934 665 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 TRPC3Q13507 836 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 BOP1Q14137 746 aaKnown RBP4.66□□□□□ -1.66
MDM2-228ENST00000542502 BRD3Q15059 726 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 ZBTB6Q15916 424 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 USP41Q3LFD5 358 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 ZNF260Q3ZCT1 412 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 ZCWPW2Q504Y3 356 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 EPC2Q52LR7 807 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 CLLU1OSQ5K130 101 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 SPATA1Q5VX52 437 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 CAVIN1Q6NZI2 390 aaKnown RBP4.66□□□□□ -1.66
MDM2-228ENST00000542502 NAPRTQ6XQN6 538 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 C11orf96Q7Z7L8 435 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 METTL23Q86XA0 190 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 CNGA4Q8IV77 575 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 NELFCDQ8IXH7 590 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 ZC3H3Q8IXZ2 948 aaKnown RBP4.66□□□□□ -1.66
MDM2-228ENST00000542502 TMEM86AQ8N2M4 240 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.66□□□□□ -1.66
MDM2-228ENST00000542502 COLGALT1Q8NBJ5 622 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 NELFBQ8WX92 580 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 JAKMIP2Q96AA8 810 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 PPP1R10Q96QC0 940 aaKnown RBP4.66□□□□□ -1.66
MDM2-228ENST00000542502 GAD1Q99259 594 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 CDCA3Q99618 268 aaPredicted RBP4.66□□□□□ -1.66
MDM2-228ENST00000542502 CBWD1Q9BRT8 395 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 APOL6Q9BWW8 343 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 NAA15Q9BXJ9 866 aaKnown RBP4.66□□□□□ -1.66
MDM2-228ENST00000542502 FSD1LQ9BXM9 530 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 ADGRE3Q9BY15 652 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 ZMAT3Q9HA38 289 aaKnown RBP4.66□□□□□ -1.66
MDM2-228ENST00000542502 PNPOQ9NVS9 261 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 DPP3Q9NY33 737 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 ADAM28Q9UKQ2 775 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 PHTF1Q9UMS5 762 aa4.66□□□□□ -1.66
MDM2-228ENST00000542502 GBF1Q92538 1859 aa4.65□□□□□ -1.66
MDM2-228ENST00000542502 GTPBP10A4D1E9 387 aaKnown RBP4.65□□□□□ -1.67
MDM2-228ENST00000542502 LACTBL1A8MY62 500 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms