RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 GAD2Q05329 585 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 DSC1Q08554 894 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 TGFBIQ15582 683 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 PHKG1Q16816 387 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 SLC25A52Q3SY17 297 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 BORAQ6PGQ7 559 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 ADGRG6Q86SQ4 1221 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 STK32CQ86UX6 486 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 ERI1Q8IV48 349 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 PALM2Q8IXS6 379 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 DEFB106AQ8N104 65 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 MARVELD2Q8N4S9 558 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 CCDC33Q8N5R6 958 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 NAT8LQ8N9F0 302 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 ZNF296Q8WUU4 475 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 NCLNQ969V3 563 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 RMDN1Q96DB5 314 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 RTP4Q96DX8 246 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 LRGUKQ96M69 825 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 BTBD9Q96Q07 612 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 KCTD15Q96SI1 283 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 KCNK16Q96T55 309 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 NPY6RQ99463 290 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 EBF4Q9BQW3 602 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 TRIM56Q9BRZ2 755 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 RHOBTB2Q9BYZ6 727 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 PITHD1Q9GZP4 211 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 BRD9Q9H8M2 597 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 TMLHEQ9NVH6 421 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 NOD1Q9Y239 953 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 PTCH2Q9Y6C5 1203 aa8.03□□□□□ -1.12
PDLIM5-221ENST00000542407 SGK1O00141 431 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 ITM2AO43736 263 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 KLHL2O95198 593 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 THRAP10827 490 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 ODC1P11926 461 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 HPGDP15428 266 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 TGM2P21980 687 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 RPL22P35268 128 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 CD86P42081 329 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 ATP5OP48047 213 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 KRT6CP48668 564 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 NRLP54845 237 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 GPX6P59796 221 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 EIF3EP60228 445 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 YWHAGP61981 247 aaKnown RBP eCLIP8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 CD300CQ08708 224 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 MORF4L2Q15014 288 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 PAN2Q504Q3 1202 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 OGFOD2Q6N063 350 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 SCYL2Q6P3W7 929 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 CRTC1Q6UUV9 634 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 KYAT3Q6YP21 454 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 DEFB107AQ8IZN7 70 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 OR10T2Q8NGX3 314 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 ANGPTL6Q8NI99 470 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 DDI1Q8WTU0 396 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 CPT1BQ92523 772 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 DACT3Q96B18 629 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 ACBD6Q9BR61 282 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 OSBPL6Q9BZF3 934 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 SLC13A1Q9BZW2 595 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 KCNK4Q9NYG8 393 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 SEPT3Q9UH03 358 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 PCOLCE2Q9UKZ9 415 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 FZD10Q9ULW2 581 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 SHOC2Q9UQ13 582 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 RPH3AQ9Y2J0 694 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 SNX8Q9Y5X2 465 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 ARVCFO00192 962 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 PFDN6O15212 129 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 AP1G1O43747 822 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 DAOAP59103 153 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 VBP1P61758 197 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 YWHAZP63104 245 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 ROR1Q01973 937 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 BST1Q10588 318 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 TFDP2Q14188 446 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 CHI3L2Q15782 390 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 HSF5Q4G112 596 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 INTS6LQ5JSJ4 861 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 SYPL2Q5VXT5 272 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 ANKRD22Q5VYY1 191 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 MYLPFQ96A32 169 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 SERAC1Q96JX3 654 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 SUSD3Q96L08 255 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 TMEM209Q96SK2 561 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 NEURL2Q9BR09 285 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 WDR83Q9BRX9 315 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 MED10Q9BTT4 135 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 CCDC106Q9BWC9 280 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 RUBCNLQ9H714 662 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 CAAP1Q9H8G2 361 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 PRM3Q9NNZ6 103 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 TRPM5Q9NZQ8 1165 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 RABGEF1Q9UJ41 708 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 AP4E1Q9UPM8 1137 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 POMPQ9Y244 141 aa8.02□□□□□ -1.13
PDLIM5-221ENST00000542407 H7C0C1 242 aa8.01□□□□□ -1.13
PDLIM5-221ENST00000542407 TNFRSF10BO14763 440 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms