RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 DDR2Q16832 855 aa9.17□□□□□ -0.94
THBS3-211ENST00000541990 ZNF829Q3KNS6 432 aaPredicted RBP9.17□□□□□ -0.94
THBS3-211ENST00000541990 SYPL2Q5VXT5 272 aa9.17□□□□□ -0.94
THBS3-211ENST00000541990 EGFLAMQ63HQ2 1017 aa9.17□□□□□ -0.94
THBS3-211ENST00000541990 PRSS55Q6UWB4 352 aaPredicted RBP9.17□□□□□ -0.94
THBS3-211ENST00000541990 LCLAT1Q6UWP7 414 aa9.17□□□□□ -0.94
THBS3-211ENST00000541990 ZYG11AQ6WRX3 759 aa9.17□□□□□ -0.94
THBS3-211ENST00000541990 SCN4BQ8IWT1 228 aa9.17□□□□□ -0.94
THBS3-211ENST00000541990 ABI1Q8IZP0 508 aa9.17□□□□□ -0.94
THBS3-211ENST00000541990 CENPLQ8N0S6 344 aaPredicted RBP9.17□□□□□ -0.94
THBS3-211ENST00000541990 FSTL5Q8N475 847 aaPredicted RBP9.17□□□□□ -0.94
THBS3-211ENST00000541990 LRRC52Q8N7C0 313 aa9.17□□□□□ -0.94
THBS3-211ENST00000541990 CCNYQ8ND76 341 aa9.17□□□□□ -0.94
THBS3-211ENST00000541990 TRIM43Q96BQ3 446 aaPredicted RBP9.17□□□□□ -0.94
THBS3-211ENST00000541990 VRTNQ9H8Y1 702 aa9.17□□□□□ -0.94
THBS3-211ENST00000541990 IL1RL2Q9HB29 575 aa9.17□□□□□ -0.94
THBS3-211ENST00000541990 CHRAC1Q9NRG0 131 aa9.17□□□□□ -0.94
THBS3-211ENST00000541990 VPS45Q9NRW7 570 aa9.17□□□□□ -0.94
THBS3-211ENST00000541990 ABI2Q9NYB9 513 aaPredicted RBP9.17□□□□□ -0.94
THBS3-211ENST00000541990 IPO11Q9UI26 975 aaKnown RBP9.17□□□□□ -0.94
THBS3-211ENST00000541990 OGDHLQ9ULD0 1010 aa9.17□□□□□ -0.94
THBS3-211ENST00000541990 A0A087WXM4 84 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 TRIM64CA6NLI5 447 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 HSPA8P11142 646 aaKnown RBP9.16□□□□□ -0.94
THBS3-211ENST00000541990 MLNP12872 115 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 MATN1P21941 496 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 NR4A1P22736 598 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 OXTRP30559 389 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 SLC7A1P30825 629 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 NME5P56597 212 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 TRAF2Q12933 501 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 DPYSL2Q16555 572 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 SV2CQ496J9 727 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 AGKQ53H12 422 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 NOMO2Q5JPE7 1267 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 RSPO2Q6UXX9 243 aaPredicted RBP9.16□□□□□ -0.94
THBS3-211ENST00000541990 NT5DC4Q86YG4 428 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 SLC41A1Q8IVJ1 513 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 MFSD6LQ8IWD5 586 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 CNTD1Q8N815 330 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.16□□□□□ -0.94
THBS3-211ENST00000541990 ZMIZ2Q8NF64 920 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 SLC35F5Q8WV83 523 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 CYGBQ8WWM9 190 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 SGCDQ92629 289 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 ZNF560Q96MR9 790 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 SMOQ99835 787 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 ADI1Q9BV57 179 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 CYP3A43Q9HB55 503 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 CHST12Q9NRB3 414 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 RGS18Q9NS28 235 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 UBP1Q9NZI7 540 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 EGFL7Q9UHF1 273 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 BCAP29Q9UHQ4 241 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 GIT1Q9Y2X7 761 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 PCDHB7Q9Y5E2 793 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 USP3Q9Y6I4 520 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 HEATR9A2RTY3 570 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 DPYSL4O14531 572 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 ADAM12O43184 909 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 MT-ND1P03886 318 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 CA8P35219 290 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 ESRRGP62508 458 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 PRKAA1Q13131 559 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 NR1D2Q14995 579 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 PLCL1Q15111 1095 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 KYAT1Q16773 422 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 FAM171A1Q5VUB5 890 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 PPP4R4Q6NUP7 873 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 GALNT18Q6P9A2 607 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 CLEC20AQ6ZU45 233 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 KCTD8Q6ZWB6 473 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 DDHD1Q8NEL9 900 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 MYLPFQ96A32 169 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 ACDQ96AP0 544 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 FAM193BQ96PV7 902 aaPredicted RBP9.16□□□□□ -0.94
THBS3-211ENST00000541990 UHRF1Q96T88 793 aaPredicted RBP9.16□□□□□ -0.94
THBS3-211ENST00000541990 FBRSL1Q9HCM7 1045 aaKnown RBP9.16□□□□□ -0.94
THBS3-211ENST00000541990 CYP4F12Q9HCS2 524 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 SACM1LQ9NTJ5 587 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 SAGE1Q9NXZ1 904 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 GTSE1Q9NYZ3 720 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 RUVBL2Q9Y230 463 aaKnown RBP9.16□□□□□ -0.94
THBS3-211ENST00000541990 DNAH14Q0VDD8 3507 aa9.16□□□□□ -0.94
THBS3-211ENST00000541990 ATP6AP2A0A1C7CYW4 349 aa9.15□□□□□ -0.94
THBS3-211ENST00000541990 YJEFN3A6XGL0 299 aa9.15□□□□□ -0.94
THBS3-211ENST00000541990 AXIN1O15169 862 aa9.15□□□□□ -0.94
THBS3-211ENST00000541990 ATP6AP2O75787 350 aa9.15□□□□□ -0.94
THBS3-211ENST00000541990 GNRH1P01148 92 aa9.15□□□□□ -0.94
THBS3-211ENST00000541990 SLC35E2BP0CK96 405 aa9.15□□□□□ -0.94
THBS3-211ENST00000541990 TSPAN8P19075 237 aa9.15□□□□□ -0.94
THBS3-211ENST00000541990 CHRM3P20309 590 aa9.15□□□□□ -0.94
THBS3-211ENST00000541990 YWHAQP27348 245 aa9.15□□□□□ -0.94
THBS3-211ENST00000541990 NMBRP28336 390 aa9.15□□□□□ -0.94
THBS3-211ENST00000541990 LRPAP1P30533 357 aa9.15□□□□□ -0.94
THBS3-211ENST00000541990 EIF2B2P49770 351 aaKnown RBP9.15□□□□□ -0.94
THBS3-211ENST00000541990 SLC6A3Q01959 620 aa9.15□□□□□ -0.94
THBS3-211ENST00000541990 TUSC3Q13454 348 aa9.15□□□□□ -0.94
THBS3-211ENST00000541990 ARHGEF6Q15052 776 aa9.15□□□□□ -0.94
THBS3-211ENST00000541990 SLC39A12Q504Y0 691 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms