RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 HTR1BP28222 390 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 PEX5P50542 639 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 RNASE9P60153 205 aaKnown RBP9.8□□□□□ -0.84
CHFR-220ENST00000541817 KRTAP10-9P60411 292 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 TUBB4BP68371 445 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 CBX1P83916 185 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 BIRC2Q13490 618 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 ELOAQ14241 798 aaKnown RBP9.8□□□□□ -0.84
CHFR-220ENST00000541817 LRRC14Q15048 493 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 COBLL1Q53SF7 1204 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 TTC39BQ5VTQ0 682 aaPredicted RBP9.8□□□□□ -0.84
CHFR-220ENST00000541817 CEACAM20Q6UY09 585 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 ZNF517Q6ZMY9 492 aaPredicted RBP9.8□□□□□ -0.84
CHFR-220ENST00000541817 GDF7Q7Z4P5 450 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 TTC7BQ86TV6 843 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 APLFQ8IW19 511 aaPredicted RBP9.8□□□□□ -0.84
CHFR-220ENST00000541817 RBMXL3Q8N7X1 1067 aaKnown RBP9.8□□□□□ -0.84
CHFR-220ENST00000541817 PLA2G15Q8NCC3 412 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 CXorf40AQ8TE69 158 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 IQCDQ96DY2 449 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 WDR92Q96MX6 357 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 KLHL32Q96NJ5 620 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 RUFY1Q96T51 708 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 ZSWIM1Q9BR11 485 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 SPON2Q9BUD6 331 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 SIK2Q9H0K1 926 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 FGF22Q9HCT0 170 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 ZNHIT6Q9NWK9 470 aaKnown RBP9.8□□□□□ -0.84
CHFR-220ENST00000541817 HECAQ9UBI9 543 aaPredicted RBP9.8□□□□□ -0.84
CHFR-220ENST00000541817 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.8□□□□□ -0.84
CHFR-220ENST00000541817 MAPK8IP1Q9UQF2 711 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 ADGRG1Q9Y653 693 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 HS3ST4Q9Y661 456 aa9.8□□□□□ -0.84
CHFR-220ENST00000541817 V9GYY5 206 aaPredicted RBP9.8□□□□□ -0.84
CHFR-220ENST00000541817 TRBV23OR9-2A0A075B6M9 112 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 PVALEFA0A1B0GWK0 134 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 TMEM110-MUSTN1A8MSY1 372 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 LGALS16A8MUM7 142 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 KRIT1O00522 736 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 AREL1O15033 823 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 CREG1O75629 220 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 GYPCP04921 128 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 VDRP11473 427 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 AK4P27144 223 aaPredicted RBP9.79□□□□□ -0.84
CHFR-220ENST00000541817 KRT9P35527 623 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 MTIF2P46199 727 aaKnown RBP9.79□□□□□ -0.84
CHFR-220ENST00000541817 RPS18P62269 152 aaKnown RBP9.79□□□□□ -0.84
CHFR-220ENST00000541817 ERCC6LQ2NKX8 1250 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 PLEKHN1Q494U1 663 aaPredicted RBP9.79□□□□□ -0.84
CHFR-220ENST00000541817 ZNF805Q5CZA5 627 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 FKBP15Q5T1M5 1219 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 RAD9BQ6WBX8 426 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 SPNS3Q6ZMD2 512 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 LEKR1Q6ZMV7 388 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 UNC13DQ70J99 1090 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 TFAP2DQ7Z6R9 452 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 ESX1Q8N693 406 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 NETO2Q8NC67 525 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 OR8K1Q8NGG5 319 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 PCMTD1Q96MG8 357 aaPredicted RBP9.79□□□□□ -0.84
CHFR-220ENST00000541817 TEFMQ96QE5 360 aaKnown RBP9.79□□□□□ -0.84
CHFR-220ENST00000541817 TSG101Q99816 390 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 DESI2Q9BSY9 194 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 C2orf49Q9BVC5 232 aaPredicted RBP9.79□□□□□ -0.84
CHFR-220ENST00000541817 CARD6Q9BX69 1037 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 TRIT1Q9H3H1 467 aaKnown RBP9.79□□□□□ -0.84
CHFR-220ENST00000541817 RUBCNLQ9H714 662 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 ABHD10Q9NUJ1 306 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 MYO1AQ9UBC5 1043 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 KLHL3Q9UH77 587 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 SLC12A6Q9UHW9 1150 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 TBC1D30Q9Y2I9 924 aa9.79□□□□□ -0.84
CHFR-220ENST00000541817 LUC7L2Q9Y383 392 aaKnown RBP9.79□□□□□ -0.84
CHFR-220ENST00000541817 TRIM49BA6NDI0 452 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 A6NL46 340 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 F5H423 210 aaPredicted RBP9.78□□□□□ -0.84
CHFR-220ENST00000541817 TIMP2P16035 220 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 BRD2P25440 801 aaKnown RBP9.78□□□□□ -0.84
CHFR-220ENST00000541817 NFKBIAP25963 317 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 TAF5Q15542 800 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 TTI2Q6NXR4 508 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 TMEM71Q6P5X7 295 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 SLC47A2Q86VL8 602 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 NRROSQ86YC3 692 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 CEP112Q8N8E3 955 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 RAB7BQ96AH8 199 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 VOPP1Q96AW1 172 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 ELMO2Q96JJ3 720 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 TUBGCP2Q9BSJ2 902 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 C1QTNF7Q9BXJ2 289 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 ULBP3Q9BZM4 244 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 KCTD10Q9H3F6 313 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 FAM204AQ9H8W3 233 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 MLXIPLQ9NP71 852 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 LZTFL1Q9NQ48 299 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 ACSS2Q9NR19 701 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 ST7Q9NRC1 585 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 MPP6Q9NZW5 540 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 OSGIN2Q9Y236 505 aa9.78□□□□□ -0.84
CHFR-220ENST00000541817 DGKBQ9Y6T7 804 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms