RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 TK2O00142 265 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 WISP3O95389 354 aaPredicted RBP12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 CRTAMO95727 393 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 IGSF6O95976 241 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 LPOP22079 712 aaPredicted RBP12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 BMP8BP34820 402 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 OCRLQ01968 901 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 BCL2L1Q07817 233 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 ITIH4Q14624 930 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 MYLK3Q32MK0 819 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 LRRC73Q5JTD7 316 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 NAPRTQ6XQN6 538 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 TSPAN33Q86UF1 283 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 ZNF366Q8N895 744 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 CALML6Q8TD86 181 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 NAT14Q8WUY8 206 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 OSCP1Q8WVF1 389 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 ANKRD49Q8WVL7 239 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 PEX13Q92968 403 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 E2F7Q96AV8 911 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 ADGRE3Q9BY15 652 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 EBF3Q9H4W6 596 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 SLC28A3Q9HAS3 691 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 NPHS2Q9NP85 383 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 IGSF5Q9NSI5 407 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 CPSF2Q9P2I0 782 aaKnown RBP12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 COPG2Q9UBF2 871 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 DPP7Q9UHL4 492 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 FBXO10Q9UK96 956 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 DOCK8Q8NF50 2099 aa12.27□□□□□ -0.44
AP003559.1-201ENST00000540906 HEPACAM2A8MVW5 462 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 GAPDHSO14556 408 aaPredicted RBP12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 KLF11O14901 512 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 HGSO14964 777 aaPredicted RBP12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 BIRC5O15392 142 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 SNNO75324 88 aaPredicted RBP12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 ADH5P11766 374 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 NEFHP12036 1026 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 STMN1P16949 149 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 HNF1BP35680 557 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 CLCN5P51795 746 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 CCNHP51946 323 aaPredicted RBP12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 STC1P52823 247 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 XIAPP98170 497 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 ECT2LQ008S8 904 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 SLC20A2Q08357 652 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 ACCSLQ4AC99 568 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 HSF5Q4G112 596 aaPredicted RBP12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 RALGPS1Q5JS13 557 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 ELMSAN1Q6PJG2 1045 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 RFLNAQ6ZTI6 216 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 GPR149Q86SP6 731 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 FRS2Q8WU20 508 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 NXPE3Q969Y0 559 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 FAM136AQ96C01 138 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 MRPL38Q96DV4 380 aaKnown RBP12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 PLA2G2FQ9BZM2 168 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 PRO3102Q9H379 93 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 IL17CQ9P0M4 197 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 ERVW-1Q9UQF0 538 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 RUVBL2Q9Y230 463 aaKnown RBP12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 MED16Q9Y2X0 877 aa12.27□□□□□ -0.45
AP003559.1-201ENST00000540906 SPTBN5Q9NRC6 3674 aaKnown RBP12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 A0A0J9YYE9 177 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 NPIPB15A6NHN6 443 aaPredicted RBP12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 CCT8L1PA6NM43 557 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 C2orf81A6NN90 581 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 TARM1B6A8C7 271 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 OR1I1O60431 355 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 CLDN7O95471 211 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 TRBC1P01850 177 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 GSTA1P08263 222 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 MC4RP32245 332 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 HADHAP40939 763 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 CCR10P46092 362 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 GRIA4P48058 902 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 EPHB1P54762 984 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 POU4F1Q01851 419 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 DLX2Q07687 328 aaPredicted RBP12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 ITGA9Q13797 1035 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 RAB30Q15771 203 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 PTPRNQ16849 979 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 TYSND1Q2T9J0 566 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 SETMARQ53H47 684 aaPredicted RBP12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 CARD16Q5EG05 197 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 TANGO2Q6ICL3 276 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 GALNT7Q86SF2 657 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 ETFBKMTQ8IXQ9 262 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 OR2A12Q8NGT7 310 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 OR6Y1Q8NGX8 325 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 TTC8Q8TAM2 541 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 HEXDCQ8WVB3 486 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 CCT6BQ92526 530 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 SMARCD2Q92925 531 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 OTUB2Q96DC9 234 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 ZDHHC6Q9H6R6 413 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 KCNK13Q9HB14 408 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 NMRAL1Q9HBL8 299 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 HPS4Q9NQG7 708 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms