RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 MFSD1Q9H3U5 465 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 PDZD7Q9H5P4 517 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 WDCPQ9H6R7 721 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 RPF2Q9H7B2 306 aaKnown RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 CHST12Q9NRB3 414 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 GID8Q9NWU2 228 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 GIN1Q9NXP7 522 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 VTI1BQ9UEU0 232 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 GNPTGQ9UJJ9 305 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 CNOT6Q9ULM6 557 aaKnown RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 DOPEY2Q9Y3R5 2298 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 A0A096LPK6 155 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 C1orf232A0A0U1RR37 186 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 TMEM88BA6NKF7 163 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 SLCO1B7G3V0H7 640 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 ZNF197O14709 1029 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 GSTA4O15217 222 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 NDUFS3O75489 264 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 LTFP02788 710 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 ERVK-10P10266 1014 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 CHRM3P20309 590 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 IL4RP24394 825 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 SLC7A1P30825 629 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 MAGEA12P43365 314 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 RACK1P63244 317 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 HTRA3P83110 453 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 PRKAA1Q13131 559 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 ZNF177Q13360 481 aaPredicted RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 PPP1R3AQ16821 1122 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 ZNF792Q3KQV3 632 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 AARS2Q5JTZ9 985 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 ZNF484Q5JVG2 852 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 GPR107Q5VW38 600 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 PARP8Q8N3A8 854 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 SCAIQ8N9R8 606 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 ANKK1Q8NFD2 765 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 LPPQ93052 612 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 NCLNQ969V3 563 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 CERS2Q96G23 380 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 QKIQ96PU8 341 aaKnown RBP eCLIP5.24□□□□□ -1.57
PROM1-220ENST00000540805 TBCBQ99426 244 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 RBBP8Q99708 897 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 TRIM54Q9BYV2 358 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 CEP41Q9BYV8 373 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 CXorf21Q9HAI6 301 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 NMRAL1Q9HBL8 299 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 PALMDQ9NP74 551 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 VTA1Q9NP79 307 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 PIH1D1Q9NWS0 290 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 MTMR10Q9NXD2 777 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 CDH23Q9H251 3354 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 FAM47E-STBD1D6RA91 191 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 H3BMQ9 156 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 KDM1AO60341 852 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 TMCC2O75069 709 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 FKTNO75072 461 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 MAFO75444 373 aaPredicted RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 PCDH8O95206 1070 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 APOA4P06727 396 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 POLBP06746 335 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 ODC1P11926 461 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 GSSP48637 474 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 PSEN2P49810 448 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 SCNN1GP51170 649 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 LIMK2P53671 638 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 TPTEP56180 551 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 IRF9Q00978 393 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 MAPK11Q15759 364 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 FXNQ16595 210 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 MOGQ16653 247 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 CA9Q16790 459 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 POM121L1PQ3SYA9 428 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 ZRANB3Q5FWF4 1079 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 SPANXN3Q5MJ09 141 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 C6orf10Q5SRN2 563 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 SMYD5Q6GMV2 418 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 TRNP1Q6NT89 227 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 LYPD8Q6UX82 237 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 GK5Q6ZS86 529 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 TPGS1Q6ZTW0 290 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 TMEM26Q6ZUK4 368 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 FAM183BPQ6ZVS7 135 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 LYSMD3Q7Z3D4 306 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 PIWIL3Q7Z3Z3 882 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 BPHLQ86WA6 291 aaPredicted RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 SPNS2Q8IVW8 549 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 FAM20CQ8IXL6 584 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 DDIASQ8IXT1 998 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 RGL4Q8IZJ4 473 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 PCDH20Q8N6Y1 951 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 CHPT1Q8WUD6 406 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 STON2Q8WXE9 905 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 LPGAT1Q92604 370 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 ISL2Q96A47 359 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 TAMM41Q96BW9 452 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 EGLN2Q96KS0 407 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 COG8Q96MW5 612 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 TCF12Q99081 682 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 NPLQ9BXD5 320 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms