RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	CDK9	P50750	372 aa	Known RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NAGLU	P54802	743 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	INCA1	Q0VD86	236 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TAF10	Q12962	218 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LRRC32	Q14392	662 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZBTB6	Q15916	424 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ARL13A	Q5H913	290 aa	Predicted RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GK5	Q6ZS86	529 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	STRA8	Q7Z7C7	330 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF786	Q8N393	782 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CCNYL1	Q8N7R7	359 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SGF29	Q96ES7	293 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MCRS1	Q96EZ8	462 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SPATA17	Q96L03	361 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TRMT61B	Q9BVS5	477 aa	Known RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	BCO2	Q9BYV7	579 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	STN1	Q9H668	368 aa	Known RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	WDCP	Q9H6R7	721 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PRDM16	Q9HAZ2	1276 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PRM3	Q9NNZ6	103 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OLAH	Q9NV23	265 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FAIM	Q9NVQ4	179 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MTMR10	Q9NXD2	777 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RAB23	Q9ULC3	237 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PRSS51	A0A1B0GVH4	220 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	BCLAF3	A2AJT9	711 aa	Known RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FAM149A	A5PLN7	773 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		J3QRK9	145 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FAM189A1	O60320	539 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TIPRL	O75663	272 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ENDOD1	O94919	500 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF23	P17027	643 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	UGT1A6	P19224	532 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SCNN1A	P37088	669 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MAGEA3	P43357	314 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RPL26	P61254	145 aa	Known RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PTK2B	Q14289	1009 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PRPSAP1	Q14558	356 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DDR2	Q16832	855 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ANO4	Q32M45	955 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HEATR6	Q6AI08	1181 aa	Known RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PTCRA	Q6ISU1	281 aa	Predicted RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ANKRD54	Q6NXT1	300 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TRAF7	Q6Q0C0	670 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ALKAL1	Q6UXT8	129 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CHST15	Q7LFX5	561 aa	Predicted RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TMCO2	Q7Z6W1	182 aa	Predicted RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	METTL3	Q86U44	580 aa	Known RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CHERP	Q8IWX8	916 aa	Known RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TP53INP2	Q8IXH6	220 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RYBP	Q8N488	228 aa	Predicted RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CCNY	Q8ND76	341 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MCU	Q8NE86	351 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FBXL8	Q96CD0	374 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RMND5B	Q96G75	393 aa	Predicted RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MSANTD3	Q96H12	275 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PCED1B	Q96HM7	432 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SCYL1	Q96KG9	808 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FCRL3	Q96P31	734 aa	Predicted RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OMD	Q99983	421 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HAUS8	Q9BT25	410 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OSBPL6	Q9BZF3	934 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ILKAP	Q9H0C8	392 aa	Predicted RBP	5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TMPRSS4	Q9NRS4	437 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PLK2	Q9NYY3	685 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZDHHC2	Q9UIJ5	367 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FBXW11	Q9UKB1	542 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MYRF	Q9Y2G1	1151 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	AP4S1	Q9Y587	144 aa		5.69	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MCM3AP	O60318	1980 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PLXNA1	Q9UIW2	1896 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SH3PXD2B	A1X283	911 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		E7ENX8	843 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		G3V2L1	256 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PSMD12	O00232	456 aa	Predicted RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PHGDH	O43175	533 aa	Known RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SYNCRIP	O60506	623 aa	Known RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TRIM13	O60858	407 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ATG13	O75143	517 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ALDH1A2	O94788	518 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OR4Q2	P0C623	313 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TPH1	P17752	444 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TFEB	P19484	476 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TPI1	P60174	286 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC6A3	Q01959	620 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CD300C	Q08708	224 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NIPAL4	Q0D2K0	466 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RTP2	Q5QGT7	225 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GPR107	Q5VW38	600 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SEL1L3	Q68CR1	1132 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GRAMD4	Q6IC98	578 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FSTL4	Q6MZW2	842 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		Q6ZNX1	250 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DSG4	Q86SJ6	1040 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PGBD3	Q8N328	593 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HJURP	Q8NCD3	748 aa	Predicted RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CATSPER1	Q8NEC5	780 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PLD4	Q96BZ4	506 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	C12orf43	Q96C57	262 aa	Known RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LRRC39	Q96DD0	335 aa		5.68	□□□□□ -1.5

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