RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 TRNAU1APQ9NX07 287 aaKnown RBP7.32□□□□□ -1.24
YBX3-209ENST00000540747 UBA2Q9UBT2 640 aaPredicted RBP7.32□□□□□ -1.24
YBX3-209ENST00000540747 ANAPC2Q9UJX6 822 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 FZD10Q9ULW2 581 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 MAN2B2Q9Y2E5 1009 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 PCDHB11Q9Y5F2 797 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 B3GALT1Q9Y5Z6 326 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 ZFC3H1O60293 1989 aaKnown RBP7.31□□□□□ -1.24
YBX3-209ENST00000540747 CREBBPQ92793 2442 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 IGHV1OR21-1A0A087WYE8 117 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 AGRPO00253 132 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 EPHB6O15197 1021 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 FGF10O15520 208 aaPredicted RBP7.31□□□□□ -1.24
YBX3-209ENST00000540747 CCP110O43303 1012 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 HTRA2O43464 458 aaPredicted RBP7.31□□□□□ -1.24
YBX3-209ENST00000540747 KRT3P12035 628 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 MYCLP1P12525 358 aaPredicted RBP7.31□□□□□ -1.24
YBX3-209ENST00000540747 PRKCSHP14314 528 aaPredicted RBP7.31□□□□□ -1.24
YBX3-209ENST00000540747 XPAP23025 273 aaPredicted RBP7.31□□□□□ -1.24
YBX3-209ENST00000540747 TEAD1P28347 426 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 HTR7P34969 479 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 CD97P48960 835 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 ATP1A2P50993 1020 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 ZNF143P52747 638 aaPredicted RBP7.31□□□□□ -1.24
YBX3-209ENST00000540747 NDST2P52849 883 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 AIF1P55008 147 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 IGFBP7Q16270 282 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 TSR1Q2NL82 804 aaKnown RBP7.31□□□□□ -1.24
YBX3-209ENST00000540747 TMEM164Q5U3C3 297 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 TRIM72Q6ZMU5 477 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 MON1BQ7L1V2 547 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 SLFN11Q7Z7L1 901 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 PHLDB2Q86SQ0 1253 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 PTRH1Q86Y79 214 aaKnown RBP7.31□□□□□ -1.24
YBX3-209ENST00000540747 PHF13Q86YI8 300 aaPredicted RBP7.31□□□□□ -1.24
YBX3-209ENST00000540747 NAGSQ8N159 534 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 MLKLQ8NB16 471 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 TSEN2Q8NCE0 465 aaKnown RBP7.31□□□□□ -1.24
YBX3-209ENST00000540747 C3orf20Q8ND61 904 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 AGBL5Q8NDL9 886 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 SLC30A5Q8TAD4 765 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 ZDHHC1Q8WTX9 485 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 PATE1Q8WXA2 126 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 JPH3Q8WXH2 748 aaPredicted RBP7.31□□□□□ -1.24
YBX3-209ENST00000540747 TEP1Q99973 2627 aaKnown RBP7.31□□□□□ -1.24
YBX3-209ENST00000540747 NCAPGQ9BPX3 1015 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 DPEP2Q9H4A9 486 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 ATP13A3Q9H7F0 1226 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 LMBRD1Q9NUN5 540 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 TMEM9Q9P0T7 183 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 TAAR2Q9P1P5 351 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 B4GALT6Q9UBX8 382 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 PILRAQ9UKJ1 303 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 SLC17A4Q9Y2C5 497 aa7.31□□□□□ -1.24
YBX3-209ENST00000540747 CELSR2Q9HCU4 2923 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 ANKRD17O75179 2603 aaKnown RBP7.3□□□□□ -1.24
YBX3-209ENST00000540747 SIGLEC16A6NMB1 481 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 ZNF891A8MT65 544 aaPredicted RBP7.3□□□□□ -1.24
YBX3-209ENST00000540747 PPM1DO15297 605 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 CAPN5O15484 640 aaPredicted RBP7.3□□□□□ -1.24
YBX3-209ENST00000540747 NKX2-8O15522 239 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 DUX1O43812 170 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 RAD1O60671 282 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 GFPT2O94808 682 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 ECEL1O95672 775 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 MBD3O95983 291 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 PEX11BO96011 259 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 SOD1P00441 154 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 IVLP07476 585 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 ELFN1P0C7U0 828 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 GPD1P21695 349 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 LHCGRP22888 699 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 AK4P27144 223 aaPredicted RBP7.3□□□□□ -1.24
YBX3-209ENST00000540747 SERPINA4P29622 427 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 CTBSQ01459 385 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 OGDHQ02218 1023 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 NSUN2Q08J23 767 aaKnown RBP eCLIP7.3□□□□□ -1.24
YBX3-209ENST00000540747 CNGA3Q16281 694 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 CLEC16AQ2KHT3 1053 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 AMZ1Q400G9 498 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 CRTC2Q53ET0 693 aaPredicted RBP7.3□□□□□ -1.24
YBX3-209ENST00000540747 CYP4V2Q6ZWL3 525 aaPredicted RBP7.3□□□□□ -1.24
YBX3-209ENST00000540747 ARHGAP22Q7Z5H3 698 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 HEATR4Q86WZ0 1026 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 CREBRFQ8IUR6 639 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 FAM114A1Q8IWE2 563 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 CACNA2D3Q8IZS8 1091 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 NPWQ8N729 165 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 ART4Q93070 314 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 MIB2Q96AX9 1013 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 DTD2Q96FN9 168 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 CATSPER2Q96P56 530 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 PSKH2Q96QS6 385 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 DPYSL5Q9BPU6 564 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 GSDMCQ9BYG8 508 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 SLC39A8Q9C0K1 460 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 CATSPERBQ9H7T0 1116 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 CARS2Q9HA77 564 aaKnown RBP7.3□□□□□ -1.24
YBX3-209ENST00000540747 WDR70Q9NW82 654 aa7.3□□□□□ -1.24
YBX3-209ENST00000540747 OCIAD1Q9NX40 245 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms